RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 LRRC36Q1X8D7 754 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 TBCELQ5QJ74 424 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ARMC4Q5T2S8 1044 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PDZK1Q5T2W1 519 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PIWIL4Q7Z3Z4 852 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 AMER2Q8N7J2 671 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 FAM172AQ8WUF8 416 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 TMEM143Q96AN5 459 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 NSMCE2Q96MF7 247 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 BBS2Q9BXC9 721 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PXMP2Q9NR77 195 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 TAS2R13Q9NYV9 303 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SH3BP4Q9P0V3 963 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SLC25A13Q9UJS0 675 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ATMINO43313 823 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 GUCY1B2O75343 617 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 TADA2AO75478 443 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 NPR3P17342 541 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ALDH1A3P47895 512 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PTDSS1P48651 473 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 HADHBP55084 474 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 CREMQ03060 361 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CDK18Q07002 472 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PPIDQ08752 370 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 TWF1Q12792 350 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PACS2Q86VP3 889 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PHF13Q86YI8 300 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 TDRPQ86YL5 185 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 C8orf59Q8N0T1 100 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 PHC3Q8NDX5 983 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 GPRC5AQ8NFJ5 357 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 AGR3Q8TD06 166 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 TCP10LQ8TDR4 215 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SERPINB11Q96P15 392 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SPATA5L1Q9BVQ7 753 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ACSS3Q9H6R3 686 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CYLDQ9NQC7 956 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 UBP1Q9NZI7 540 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ZNF70Q9UC06 446 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 A0A1B0GUL6 1792 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PXDNQ92626 1479 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ITGB4P16144 1822 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 UMODL1Q5DID0 1318 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 C5P01031 1676 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 RGSL1A5PLK6 1076 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DYRK3O43781 588 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SASH3O75995 380 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DNAJB1P25685 340 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ADARP55265 1226 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 ERVK-9P63128 1117 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 KIZQ2M2Z5 673 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 N4BP2L1Q5TBK1 243 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 MAP4K3Q8IVH8 894 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SEPT12Q8IYM1 358 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ENKURQ8TC29 256 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 MTMR8Q96EF0 704 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 L3MBTL3Q96JM7 780 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 PANX3Q96QZ0 392 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 OSBPL10Q9BXB5 764 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 PACSIN1Q9BY11 444 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 DPP7Q9UHL4 492 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 LGALS13Q9UHV8 139 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 CRLS1Q9UJA2 301 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 PLK4O00444 970 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 MAGEC1O60732 1142 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ITGB3P05106 788 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 IL6P05231 212 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 COL6A2P12110 1019 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 GSTT1P30711 240 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 CCR1P32246 355 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SPP2Q13103 211 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 MDH1BQ5I0G3 518 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 USP49Q70CQ1 688 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SH3BP5LQ7L8J4 393 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ILDR1Q86SU0 546 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 ITIH5Q86UX2 942 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 TSPAN14Q8NG11 270 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ACTL9Q8TC94 416 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 PABPC5Q96DU9 382 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 QRFPRQ96P65 431 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 TBL1YQ9BQ87 522 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 CLK4Q9HAZ1 481 aaKnown RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 KLHL28Q9NXS3 571 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ATXN10Q9UBB4 475 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 C3orf18Q9UK00 162 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 A0A0A0MRY4 1105 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 EFCAB10A6NFE3 127 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 TULP2O00295 520 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 TCEA3O75764 348 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 UMPSP11172 480 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ITGB6P18564 788 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 HIRAP54198 1017 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 TRAF3Q13114 568 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 ZNF177Q13360 481 aaPredicted RBP4.5□□□□□ -1.69
CHD9-201ENST00000219084 NFIXQ14938 502 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 NEK5Q6P3R8 708 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 CASP12Q6UXS9 341 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 KRT74Q7RTS7 529 aa4.5□□□□□ -1.69
CHD9-201ENST00000219084 SPATA13Q96N96 652 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms