RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 STMN1P16949 149 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 CDH17Q12864 832 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 PDPK2PQ6A1A2 396 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 PSTKQ8IV42 348 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 DDIASQ8IXT1 998 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 BANPQ8N9N5 519 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 ICA1LQ8NDH6 482 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 SMARCD1Q96GM5 515 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 SYBUQ9NX95 663 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 NSMCE4AQ9NXX6 385 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 PLLPQ9Y342 182 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 IPPQ9Y573 584 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 IGKV6D-21A0A0A0MT36 114 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 PDE5AO76074 875 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 NDUFV1P49821 464 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 YWHAHQ04917 246 aaPredicted RBP12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 MAPRE1Q15691 268 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 SCARA3Q6AZY7 606 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 LAYNQ6UX15 382 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 STRADAQ7RTN6 431 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 DEFB107AQ8IZN7 70 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 DUSP16Q9BY84 665 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 UPF3AQ9H1J1 476 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 ZFYVE28Q9HCC9 887 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 SOX13Q9UN79 622 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 CDYLQ9Y232 598 aa12.65□□□□□ -0.38
TM9SF4-201ENST00000217315 TRIM13O60858 407 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 MT-CO1P00395 513 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 PGK1P00558 417 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 NFKB1P19838 968 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 HDAC4P56524 1084 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 TBCCQ15814 346 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 SOWAHAQ2M3V2 549 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 CHSY1Q86X52 802 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 RPRD1AQ96P16 312 aaPredicted RBP12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 CPNE1Q99829 537 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 LRMDAQ9H2I8 198 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 CNTN6Q9UQ52 1028 aa12.65□□□□□ -0.39
TM9SF4-201ENST00000217315 XPO1O14980 1071 aaKnown RBP12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 EDNRBP24530 442 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 GEMP55040 296 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 SPANXN3Q5MJ09 141 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 C10orf120Q5SQS8 335 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 GRTP1Q5TC63 336 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 SEL1L3Q68CR1 1132 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 KRT80Q6KB66 452 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 PACS1Q6VY07 963 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 PGLYRP2Q96PD5 576 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 DTLQ9NZJ0 730 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 CACNG4Q9UBN1 327 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 ANGPTL3Q9Y5C1 460 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 COL1A2P08123 1366 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 KRT36O76013 467 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 PROCP04070 461 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 CDH5P33151 784 aaPredicted RBP12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 ADRA1BP35368 520 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 MRPS35P82673 323 aaKnown RBP12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 MED21Q13503 144 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 RIPK1Q13546 671 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 CRYMQ14894 314 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 RAB6CQ53S08 254 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 TDRD5Q8NAT2 981 aaKnown RBP12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 RAB6CQ9H0N0 254 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 TRPV6Q9H1D0 765 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 NT5MQ9NPB1 228 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 MAN1C1Q9NR34 630 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 ARHGEF4Q9NR80 690 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 SUFUQ9UMX1 484 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 ZCCHC18P0CG32 403 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 CSH1P0DML2 217 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 CSH2P0DML3 217 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 CCR1P32246 355 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 LILRA4P59901 499 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 UBAP2LQ14157 1087 aaKnown RBP12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 CSHL1Q14406 222 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 TTC7BQ86TV6 843 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 IGDCC3Q8IVU1 814 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 ZC3H15Q8WU90 426 aaKnown RBP12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 MAML3Q96JK9 1138 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 SNX27Q96L92 541 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 SUDS3Q9H7L9 328 aaPredicted RBP12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 NMRAL1Q9HBL8 299 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 DMAP1Q9NPF5 467 aaPredicted RBP12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 TCF7L2Q9NQB0 619 aa12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 MYH9P35579 1960 aaKnown RBP12.64□□□□□ -0.39
TM9SF4-201ENST00000217315 TYW5A2RUC4 315 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 CXorf49A8MYA2 514 aaPredicted RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 KIF3CO14782 793 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 APOA4P06727 396 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 PTPN7P35236 360 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 TUBP50607 506 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 NAGLUP54802 743 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 SLC25A3Q00325 362 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 EFEMP1Q12805 493 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 FAM83EQ2M2I3 478 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 TRMT5Q32P41 509 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 BLOC1S5Q8TDH9 187 aa12.63□□□□□ -0.39
TM9SF4-201ENST00000217315 RNF39Q9H2S5 420 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms