RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 NEMP2A6NFY4 417 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 FBXO21O94952 628 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 CYP2D6P10635 497 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 DRD4P21917 467 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 EIF3EP60228 445 aaKnown RBP3.52□□□□□ -1.85
NEB-201ENST00000172853 MLLT1Q03111 559 aaPredicted RBP3.52□□□□□ -1.85
NEB-201ENST00000172853 PTSQ03393 145 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 HIC1Q14526 733 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 NR1D2Q14995 579 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 TCHHL1Q5QJ38 904 aaPredicted RBP3.52□□□□□ -1.85
NEB-201ENST00000172853 TRIQKQ629K1 86 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 CCDC81Q6ZN84 652 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 HIPK2Q9H2X6 1198 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 KLHL1Q9NR64 748 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 GSTK1Q9Y2Q3 226 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 TCOF1Q13428 1488 aaKnown RBP3.52□□□□□ -1.85
NEB-201ENST00000172853 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 SERPINA3P01011 423 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 BMP7P18075 431 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 CHRNA5P30532 468 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 ECH1Q13011 328 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 PPIGQ13427 754 aaKnown RBP eCLIP3.52□□□□□ -1.85
NEB-201ENST00000172853 SQLEQ14534 574 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 NKX1-1Q15270 411 aaPredicted RBP3.52□□□□□ -1.85
NEB-201ENST00000172853 IPMKQ8NFU5 416 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 OR2AJ1Q8NGZ0 328 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.52□□□□□ -1.85
NEB-201ENST00000172853 ADAM7Q9H2U9 754 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 HSPBP1Q9NZL4 362 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 PHKG2P15735 406 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 PTGER2P43116 358 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 FOXM1Q08050 763 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 LRRC41Q15345 812 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 UBE2SQ16763 222 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 ZMYM1Q5SVZ6 1142 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 MON1BQ7L1V2 547 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 SVOPQ8N4V2 548 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 FLCNQ8NFG4 579 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 SMURF1Q9HCE7 757 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 ZCCHC17Q9NP64 241 aaKnown RBP3.52□□□□□ -1.85
NEB-201ENST00000172853 ADPRHL2Q9NX46 363 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 CARMIL3Q8ND23 1372 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 A2MP01023 1474 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 DGAT1O75907 488 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 ARFIP1P53367 373 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 CERCAMQ5T4B2 595 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 CBWD2Q8IUF1 395 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 OTUB2Q96DC9 234 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 RRN3Q9NYV6 651 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 CDC14AQ9UNH5 594 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 CFTRP13569 1480 aa3.52□□□□□ -1.85
NEB-201ENST00000172853 F5H423 210 aaPredicted RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 CXCL14O95715 111 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 THP07101 528 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ITGA3P26006 1051 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 GDI2P50395 445 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 PTPN12Q05209 780 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 ATL1Q8WXF7 558 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 RNF25Q96BH1 459 aaPredicted RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 GPR20Q99678 358 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 C10orf88Q9H8K7 445 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 IGSF1Q8N6C5 1336 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ZBTB5O15062 677 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CYB5BO43169 146 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 HAUS5O94927 633 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CHGBP05060 677 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 EFEMP1Q12805 493 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 EMC2Q15006 297 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TAB1Q15750 504 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ZKSCAN8Q15776 578 aaPredicted RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 SWI5Q1ZZU3 235 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ZNF564Q8TBZ8 553 aaPredicted RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 SH3GLB2Q9NR46 395 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 RPAP1Q9BWH6 1393 aaPredicted RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 A0A087WWV3 80 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 A0A0G2JLW4 131 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 LGR5O75473 907 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SYNGR4O95473 234 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 ME2P23368 584 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CDH8P55286 799 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 BCL2L1Q07817 233 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 MYBPC3Q14896 1274 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SLFNL1Q499Z3 407 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 PDZK1Q5T2W1 519 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 B3GALT6Q96L58 329 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 FAM117AQ9C073 453 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 MRM3Q9HC36 420 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 RAB9BQ9NP90 201 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 GGA3Q9NZ52 723 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 OVOS2A0A0G2JMS6 1433 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 OVOS2A0A0J9YW53 1432 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 OVOS2Q6IE36 1432 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 A0A0G2JND7 137 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CLDN4O14493 209 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 TSPAN1O60635 241 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 RSL1D1O76021 490 aaKnown RBP3.51□□□□□ -1.85
NEB-201ENST00000172853 UBXN7O94888 489 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 SERPINA4P29622 427 aa3.51□□□□□ -1.85
NEB-201ENST00000172853 CSTF2P33240 577 aaKnown RBP eCLIP3.51□□□□□ -1.85
NEB-201ENST00000172853 NOGQ13253 232 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms