RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Il10P18893 178 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gnat1P20612 350 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pcgf2P23798 342 aaKnown RBP9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nkx2-5P42582 318 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Aldh2P47738 519 aaKnown RBP9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Atp6v1b2P62814 511 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Txn2P97493 166 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pld2P97813 933 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Wdr36Q3TAQ9 899 aaKnown RBP9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zfp217Q3U0X6 1041 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Wdr93Q402B2 695 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pla2g4fQ50L41 855 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tmem143Q8VD26 458 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fads3Q9JJE7 449 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Crlf3Q9Z2L7 442 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm28038F7BCN9 126 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Angpt2O35608 496 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pitpnm1O35954 1243 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Asna1O54984 348 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Adam15O88839 864 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tcea1P10711 301 aaKnown RBP9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 EsrrgP62509 458 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 CrxosQ3UL53 246 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pydc3Q3V3Q4 588 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fbxw2Q60584 422 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Orc2Q60862 576 aaKnown RBP9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Spa17Q62252 149 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfyve28Q6ZPK7 905 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ddx55Q6ZPL9 600 aaKnown RBP9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Supt20hQ7TT00 530 aaKnown RBP9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Miga2Q8BK03 593 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 B430218F22RikQ8BQR5 223 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ufl1Q8CCJ3 793 aaKnown RBP9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nek9Q8K1R7 984 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfp709Q8VC29 727 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pcdhgb1Q91XX8 918 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 WaslQ91YD9 501 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 SmtnQ921U8 923 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cmtm3Q99LJ5 184 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc7a5Q9Z127 512 aa9.15□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm16368A0A1Y7VNG9 144 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm13119B1ARV5 481 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cdr2P97817 455 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Col6a1Q04857 1025 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cyp4f37Q3V1F1 546 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mthfd1lQ3V3R1 977 aaKnown RBP9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 C130050O18RikQ497Y9 356 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Armc12Q80X86 340 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gpr68Q8BFQ3 365 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pex26Q8BGI5 305 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Clba1Q8BHN9 321 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 PcgF3Q8BTQ0 241 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Camkk2Q8C078 588 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Polr1eQ8K202 482 aaKnown RBP9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 FggQ8VCM7 436 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Syt5Q9R0N5 386 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Smg6P61406 1418 aaKnown RBP9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfp993A2A8V4 313 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfp992B1ASD8 573 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 CflarO35732 481 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Surf1P09925 306 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Serpind1P49182 478 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fam83hQ148V8 1209 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 4930596D02RikQ3V0H9 216 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cyfip1Q7TMB8 1253 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cars2Q8BYM8 551 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mfsd9Q8C0T7 466 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfp991Q8R1N3 573 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Oas1cQ924S2 362 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Lztr1Q9CQ33 837 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gid8Q9D7M1 228 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rgs20Q9QZB1 239 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fbrsl1E9Q9T0 1031 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm7945F6QI24 236 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Smcr8Q3UMB5 935 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 GmncQ3URY2 333 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fam228bQ497Q6 232 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cd6Q61003 665 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fnip1Q68FD7 1165 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ssxb5Q6XAS2 159 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Olfr867Q7TRF3 331 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gpr101Q80T62 511 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Prkd2Q8BZ03 875 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 AcppQ8CE08 381 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Colec10Q8CF98 277 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Chrna3Q8R4G9 499 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pcdhgb2Q91XX7 928 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Wdr6Q99ME2 1125 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ifi44lQ9BDB7 447 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Q9CYI0 393 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Msh6P54276 1358 aaKnown RBP9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 A0A286YDG0 184 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm6096D3YTY6 151 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm10376D3YXI8 184 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3543D3Z235 184 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm4181E9Q7X3 184 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 A430033K04RikE9Q8G5 680 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm10375L7N286 184 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm3573L7N292 184 aa9.14□□□□□ -0.95
Clcn3-202ENSMUST00000056508 GuloP58710 440 aa9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms