RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 SPINDOCQ05AH6 381 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fam129aQ3UW53 926 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mthfd1lQ3V3R1 977 aaKnown RBP11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Prkaa1Q5EG47 559 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tpd52Q62393 224 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slitrk1Q810C1 696 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cabcoco1Q8CDT7 208 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Frmd4bQ920B0 1035 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Q9CPS8 106 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fbxo32Q9CPU7 355 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 TheglQ9DA15 459 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 MkksQ9JI70 570 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Nup98Q6PFD9 1816 aaKnown RBP11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm21964A0A1W2P7S4 437 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Klf6O08584 283 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 PhexP70669 749 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 AurkaP97477 395 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Q3U4G0 281 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ctc1Q5SUQ9 1212 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Chi3l1Q61362 389 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ddx4Q61496 702 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Scube1Q6NZL8 1018 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Xpo1Q6P5F9 1071 aaKnown RBP11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 B3galnt2Q8BG28 504 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pcmtd2Q8BHD8 359 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Unc45aQ99KD5 944 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Toe1Q9D2E2 511 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gstt4Q9D4P7 240 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lima1Q9ERG0 753 aaKnown RBP11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cables1Q9ESJ1 568 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Dbn1Q9QXS6 706 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Chek2Q9Z265 546 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Znf318Q99PP2 2237 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fer1l6E0CZ42 1862 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Golgb1E9PVZ8 3238 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm5930D3Z257 264 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cdh18E9Q9Q6 790 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm44G3UW88 330 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 B020004C17RikJ3QP07 232 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kpna6O35345 536 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 LmnaP48678 665 aaKnown RBP11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tubgcp3P58854 905 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Plk1Q07832 603 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Glt6d1Q2NKH9 311 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Entpd7Q3TCT4 606 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lrrn4clQ3TYX2 239 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mrgprx2Q3UG50 352 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ceacam5Q3UKK2 947 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Clec1aQ8BWY2 269 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pak5Q8C015 719 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Nlrp4bQ8C6J9 863 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Glis1Q8K1M4 789 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 TrabdQ99JY4 376 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Dpp3Q99KK7 738 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tm9sf1Q9DBU0 606 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ropn1Q9ESG2 212 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tagln3Q9R1Q8 199 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ankrd31A0A140LI88 1765 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm8369E9PZI3 166 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Vmn2r104E9Q2J5 860 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm7942L7N277 499 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm3187M0QWW3 260 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 C1qbpO35658 278 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mmp15O54732 657 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Per3O70361 1113 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Sypl2O89104 264 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gjb3P28231 270 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slc9b2Q5BKR2 547 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pik3r5Q5SW28 871 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Shroom1Q5SX79 823 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ino80dQ66JY2 873 aaKnown RBP11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mvb12bQ6KAU4 317 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kcng4Q80XM3 506 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 PdhxQ8BKZ9 501 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mtss1Q8R1S4 759 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rps6kl1Q8R2S1 544 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 4921530L21RikQ9CQ47 274 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Poc5Q9DBS8 558 aa11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Akap8lQ9R0L7 642 aaKnown RBP11.12□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cbx3P23198 183 aaKnown RBP11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gbp10Q000W5 611 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Msx2Q03358 267 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Q3TQQ9 903 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Trim75Q3UWZ0 467 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Itm2aQ61500 263 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Scd4Q6T707 353 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Abraxas1Q8BPZ8 407 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 TdrpQ8C5P7 182 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 ThtpaQ8JZL3 224 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 BsndQ8VIM4 307 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Sun1Q9D666 913 aaKnown RBP11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 MsraQ9D6Y7 233 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Nup50Q9JIH2 466 aaKnown RBP11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Hey2Q9QUS4 339 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm29554A0A087WNW4 188 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 0610012G03RikA0A0J9YTR2 95 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Btnl4A2CG29 586 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kpna7C0LLJ0 499 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Clca3bE9PUL3 1044 aa11.11□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ccdc62E9PVD1 701 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms