RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 BNC1Q01954 994 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 PTSQ03393 145 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 TARDBPQ13148 414 aaKnown RBP eCLIP6.54□□□□□ -1.36
PRKCH-228ENST00000640011 TTC31Q49AM3 519 aaPredicted RBP6.54□□□□□ -1.36
PRKCH-228ENST00000640011 CCDC157Q569K6 752 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 SERPINA13PQ6UXR4 307 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 FAM35AQ86V20 835 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 TREML1Q86YW5 311 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 LSMEM2Q8N112 164 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 ZNF276Q8N554 614 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 OXR1Q8N573 874 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 ZNF248Q8NDW4 579 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 OR5B17Q8NGF7 314 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 OR2T3Q8NH03 318 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 SCAMP5Q8TAC9 235 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 TMEM176AQ96HP8 235 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 KCNK16Q96T55 309 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 MRPL45Q9BRJ2 306 aaKnown RBP6.54□□□□□ -1.36
PRKCH-228ENST00000640011 B3GNT5Q9BYG0 378 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 SLC6A17Q9H1V8 727 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 LHX5Q9H2C1 402 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 PCIF1Q9H4Z3 704 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 RUBCNLQ9H714 662 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 CSNK1G1Q9HCP0 422 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 PNPLA8Q9NP80 782 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 ELOVL2Q9NXB9 296 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 GMIPQ9P107 970 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 DCTN4Q9UJW0 460 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 SCML1Q9UN30 329 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 PLA2G4CQ9UP65 541 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 SCML2Q9UQR0 700 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 DYRK1BQ9Y463 629 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 PCDHA5Q9Y5H7 936 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 TCHHQ07283 1943 aa6.54□□□□□ -1.36
PRKCH-228ENST00000640011 MYH11P35749 1972 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 ANAPC1Q9H1A4 1944 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 FRMD3A2A2Y4 597 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 B8ZZF3 427 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 H0Y8X5 98 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CLDN5O00501 218 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 ARHGAP6O43182 974 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 TLX3O43711 291 aaPredicted RBP6.53□□□□□ -1.36
PRKCH-228ENST00000640011 STX6O43752 255 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 TSPAN3O60637 253 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 SEMA4FO95754 770 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 DLATP10515 647 aaKnown RBP6.53□□□□□ -1.36
PRKCH-228ENST00000640011 RALAP11233 206 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 IDEP14735 1019 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CTSKP43235 329 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 AP3M2P53677 418 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CACNA2D1P54289 1103 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CXADRP78310 365 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 TLE3Q04726 772 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 GRIN1Q05586 938 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 ZNF234Q14588 700 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 TBC1D25Q3MII6 688 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 SLC45A4Q5BKX6 768 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 HES3Q5TGS1 186 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 FYB2Q5VWT5 728 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 RRAGBQ5VZM2 374 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 LARP1BQ659C4 914 aaKnown RBP6.53□□□□□ -1.36
PRKCH-228ENST00000640011 Q6ZNB5 142 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CCDC73Q6ZRK6 1079 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 BRAPQ7Z569 592 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CCDC65Q8IXS2 484 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CPXM2Q8N436 756 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 ZNF557Q8N988 423 aaPredicted RBP6.53□□□□□ -1.36
PRKCH-228ENST00000640011 WFIKKN2Q8TEU8 576 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 RFFLQ8WZ73 363 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CNDP2Q96KP4 475 aaKnown RBP6.53□□□□□ -1.36
PRKCH-228ENST00000640011 ZNF578Q96N58 590 aaPredicted RBP6.53□□□□□ -1.36
PRKCH-228ENST00000640011 LGMNQ99538 433 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 ELF4Q99607 663 aaPredicted RBP6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CGRRF1Q99675 332 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CIPCQ9C0C6 399 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 LRRC27Q9C0I9 530 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 DPEP3Q9H4B8 488 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 C6orf106Q9H6K1 298 aaPredicted RBP6.53□□□□□ -1.36
PRKCH-228ENST00000640011 KRT82Q9NSB4 513 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 TMEM30AQ9NV96 361 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 CUEDC1Q9NWM3 386 aaPredicted RBP6.53□□□□□ -1.36
PRKCH-228ENST00000640011 HSPBP1Q9NZL4 362 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 ADAMTS1Q9UHI8 967 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 NCKAP1Q9Y2A7 1128 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 ANK1P16157 1881 aa6.53□□□□□ -1.36
PRKCH-228ENST00000640011 ADAMTS9Q9P2N4 1935 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 ASXL3Q9C0F0 2248 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 A0A1W2PPC4 97 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 ANKRD33BA6NCL7 494 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 TGFBR3LH3BV60 316 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 EIF3DO15371 548 aaKnown RBP eCLIP6.52□□□□□ -1.37
PRKCH-228ENST00000640011 MAGEC1O60732 1142 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 RNASEH1O60930 286 aaKnown RBP6.52□□□□□ -1.37
PRKCH-228ENST00000640011 PHACTR2O75167 634 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 CLSTN1O94985 981 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 FSBPO95073 299 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 CST3P01034 146 aaPredicted RBP6.52□□□□□ -1.37
PRKCH-228ENST00000640011 ATP5BP06576 529 aaKnown RBP6.52□□□□□ -1.37
PRKCH-228ENST00000640011 FAM200BP0CF97 657 aa6.52□□□□□ -1.37
PRKCH-228ENST00000640011 RARGP13631 454 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms