RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 FIBCD1Q8N539 461 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 JOSD2Q8TAC2 188 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 AUTS2Q8WXX7 1259 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 MCEEQ96PE7 176 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 TRAPPC9Q96Q05 1148 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 SLC4A5Q9BY07 1137 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 ZCWPW1Q9H0M4 648 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 SIGLEC16A6NMB1 481 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 EFEMP2O95967 443 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 LINC00271P0C7V0 271 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 RPA3P35244 121 aaPredicted RBP11.94□□□□□ -0.5
ATRX-213ENST00000624032 NDUFV1P49821 464 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 RCN1Q15293 331 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 RFWD3Q6PCD5 774 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 GPRIN1Q7Z2K8 1008 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 EMC1Q8N766 993 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 SPATA18Q8TC71 538 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 ZNF398Q8TD17 642 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 ABI2Q9NYB9 513 aaPredicted RBP11.94□□□□□ -0.5
ATRX-213ENST00000624032 GRID1Q9ULK0 1009 aa11.94□□□□□ -0.5
ATRX-213ENST00000624032 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
ATRX-213ENST00000624032 POC1B-GALNT4F8VUJ3 575 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 PAPSS1O43252 624 aaPredicted RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 TLL1O43897 1013 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 CCDC22O60826 627 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 ZWINTO95229 277 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 LAG3P18627 525 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 GABRB2P47870 512 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 OGDHQ02218 1023 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 SLC5A9Q2M3M2 681 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 OTOAQ7RTW8 1153 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 CLNKQ7Z7G1 428 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 MTDHQ86UE4 582 aaKnown RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 C4orf33Q8N1A6 199 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 ZCCHC9Q8N567 271 aaKnown RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 TTC9BQ8N6N2 239 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 ATAD1Q8NBU5 361 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 IFT43Q96FT9 208 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 TMEM169Q96HH4 297 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 HERPUD2Q9BSE4 406 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 PARVAQ9NVD7 372 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 SPG21Q9NZD8 308 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 R3HDM2Q9Y2K5 976 aaKnown RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 NEU2Q9Y3R4 380 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 INSL6Q9Y581 213 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 NLRC5Q86WI3 1866 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 TROVE2P10155 538 aaKnown RBP eCLIP11.93□□□□□ -0.5
ATRX-213ENST00000624032 DNAJB2P25686 324 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 RFC1P35251 1148 aaPredicted RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 POLE2P56282 527 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 ELAVL2Q12926 359 aaKnown RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 SHHQ15465 462 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 FAM102AQ5T9C2 384 aaPredicted RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 SDHAF4Q5VUM1 108 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 ZNF280DQ6N043 979 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 TMEM110Q86TL2 294 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 FEZF2Q8TBJ5 459 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 SCG3Q8WXD2 468 aaKnown RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 MIPEPQ99797 713 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 CADM1Q9BY67 442 aaKnown RBP11.93□□□□□ -0.5
ATRX-213ENST00000624032 NPHS2Q9NP85 383 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 CYLDQ9NQC7 956 aa11.93□□□□□ -0.5
ATRX-213ENST00000624032 XPO1O14980 1071 aaKnown RBP11.92□□□□□ -0.5
ATRX-213ENST00000624032 SOAT2O75908 522 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 ARHGEF15O94989 841 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 SETSIPP0DME0 302 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 GCAP28676 217 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 GPR15P49685 360 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 ADIGQ0VDE8 80 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 SLC1A5Q15758 541 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 USP41Q3LFD5 358 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 KIAA1841Q6NSI8 718 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 PPP1R2P3Q6NXS1 205 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 DCUN1D2Q6PH85 259 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 ZC3H18Q86VM9 953 aaKnown RBP11.92□□□□□ -0.5
ATRX-213ENST00000624032 SPATA2LQ8IUW3 424 aaPredicted RBP11.92□□□□□ -0.5
ATRX-213ENST00000624032 RNF168Q8IYW5 571 aaPredicted RBP11.92□□□□□ -0.5
ATRX-213ENST00000624032 PPFIBP2Q8ND30 876 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 ZNF75CPQ92670 426 aaPredicted RBP11.92□□□□□ -0.5
ATRX-213ENST00000624032 TTC25Q96NG3 672 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 RAD9AQ99638 391 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 TUBB6Q9BUF5 446 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 SAYSD1Q9NPB0 183 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 SLC27A5Q9Y2P5 690 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 CDY1Q9Y6F8 540 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 RANBP2P49792 3224 aaKnown RBP11.92□□□□□ -0.5
ATRX-213ENST00000624032 TMEM191CA6NGB0 347 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 TBC1D4O60343 1298 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 KRT3P12035 628 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 SLC34A1Q06495 639 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 CCNG2Q16589 344 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 CTC1Q2NKJ3 1217 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 RNF19BQ6ZMZ0 732 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 LRRC74BQ6ZQY2 392 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 TNS4Q8IZW8 715 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 MCRS1Q96EZ8 462 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 SMARCD1Q96GM5 515 aa11.92□□□□□ -0.5
ATRX-213ENST00000624032 SLC9A7Q96T83 725 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms