RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PAN2Q504Q3 1202 aaKnown RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 SYCP2LQ5T4T6 812 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 SCYL2Q6P3W7 929 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 ZNF449Q6P9G9 518 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 MTDHQ86UE4 582 aaKnown RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 ZDHHC17Q8IUH5 632 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 LRRC43Q8N309 656 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 FAM13CQ8NE31 585 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 STK32AQ8WU08 396 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 CASD1Q96PB1 797 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 FAM193BQ96PV7 902 aaPredicted RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 FAM111AQ96PZ2 611 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 MRPL45Q9BRJ2 306 aaKnown RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 C11orf84Q9BUA3 381 aaPredicted RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 UBE2OQ9C0C9 1292 aaKnown RBP18■□□□□ 0.47
FAM3A-222ENST00000621967 TBC1D13Q9NVG8 400 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 NME7Q9Y5B8 376 aa18■□□□□ 0.47
FAM3A-222ENST00000621967 PTPN4P29074 926 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 OVGP1Q12889 678 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 LRRC6Q86X45 466 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 CFAP36Q96G28 342 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 YME1L1Q96TA2 773 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 ZBED2Q9BTP6 218 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 KCNK13Q9HB14 408 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 GOLGA2P5Q9HBQ8 144 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 MKS1Q9NXB0 559 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 HEY1Q9Y5J3 304 aa17.99■□□□□ 0.47
FAM3A-222ENST00000621967 TRIM49D1C9J1S8 452 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 CCNFP41002 786 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 PTPN9P43378 593 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 SERPINB4P48594 390 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 TUSC3Q13454 348 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 DPYSL2Q16555 572 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 C9orf50Q5SZB4 431 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 ACOT1Q86TX2 421 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 CDKL3Q8IVW4 592 aaPredicted RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 SKA1Q96BD8 255 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 RSRC1Q96IZ7 334 aaKnown RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 NRDE2Q9H7Z3 1164 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 ZC3H7BQ9UGR2 993 aaKnown RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 DCTN4Q9UJW0 460 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 PTPRSQ13332 1948 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 CASTOR2A6NHX0 329 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 CXorf49A8MYA2 514 aaPredicted RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 PEX11AO75192 247 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 GJB5O95377 273 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 SNRPAP09012 282 aaKnown RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 DLDP09622 509 aaKnown RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 TPSB2P20231 275 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 SNX16P57768 344 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 SOX4Q06945 474 aaPredicted RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 TPSAB1Q15661 275 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 FAXCQ5TGI0 409 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 ARHGAP17Q68EM7 881 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 ZNF534Q76KX8 674 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 LONP2Q86WA8 852 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 PPM1NQ8N819 430 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 PHOSPHO2Q8TCD6 241 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 CENPIQ92674 756 aaPredicted RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 SRPK1Q96SB4 655 aaKnown RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 RNPEPL1Q9HAU8 725 aa17.98■□□□□ 0.47
FAM3A-222ENST00000621967 MTO1Q9Y2Z2 717 aaKnown RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 FNDC1Q4ZHG4 1894 aaPredicted RBP17.98■□□□□ 0.47
FAM3A-222ENST00000621967 TNRC18O15417 2968 aaPredicted RBP17.97■□□□□ 0.47
FAM3A-222ENST00000621967 COPEO14579 308 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 GCATO75600 419 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 KRT37O76014 449 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 APOEP02649 317 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 DESP17661 470 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 CYP2F1P24903 491 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 EPHB2P29323 1055 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 SCNN1AP37088 669 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 ARFIP2P53365 341 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 CDK16Q00536 496 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 WASHC2DQ5SRD0 308 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 ARCQ7LC44 396 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 UNC93AQ86WB7 457 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 HERC6Q8IVU3 1022 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 SCUBE3Q8IX30 993 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 MAB21L3Q8N8X9 362 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 TTC17Q96AE7 1141 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 GDF15Q99988 308 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 ALG13Q9NP73 1137 aaKnown RBP17.97■□□□□ 0.47
FAM3A-222ENST00000621967 SMYD2Q9NRG4 433 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 FAM49BQ9NUQ9 324 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 SNX9Q9Y5X1 595 aa17.97■□□□□ 0.47
FAM3A-222ENST00000621967 PDE4DIPQ5VU43 2346 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 A0A0G2JND7 137 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 PPEF2O14830 753 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 DIAPH2O60879 1101 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 HAUS5O94927 633 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 APRTP07741 180 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 BGNP21810 368 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 L1CAMP32004 1257 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 RPL34P49207 117 aaKnown RBP17.96■□□□□ 0.47
FAM3A-222ENST00000621967 BTG3Q14201 252 aaPredicted RBP17.96■□□□□ 0.47
FAM3A-222ENST00000621967 SHHQ15465 462 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 FAM182AQ5T1J6 154 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 C9orf57Q5W0N0 161 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 CDHR3Q6ZTQ4 885 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms