RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SLC9A3R1O14745 358 aaPredicted RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 NPTX2P47972 431 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 OTUD4Q01804 1114 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM171A1Q5VUB5 890 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 ZIM3Q96PE6 472 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 ZCCHC17Q9NP64 241 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 MAGEA13PA6NCF6 341 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 DPEP1P16444 411 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 S100GP29377 79 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 ORC1Q13415 861 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 Q4G0T1 1027 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 SLC44A4Q53GD3 710 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 C11orf63Q6NUN7 778 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 STOX1Q6ZVD7 989 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 ILDR2Q71H61 639 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM228AQ86W67 206 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 CACTIN-AS1Q8N1I8 211 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 TMCO1Q9UM00 188 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 MYO18AQ92614 2054 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 MANSC4A6NHS7 340 aaPredicted RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 H3BN98 237 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 UMPSP11172 480 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 BTG3Q14201 252 aaPredicted RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 PTGISQ16647 500 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 DPY30Q9C005 99 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 RBM22Q9NW64 420 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 SPATA2Q9UM82 520 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 PPRC1Q5VV67 1664 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 STX11O75558 287 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 COPZ1P61923 177 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 BOP1Q14137 746 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 SLC47A2Q86VL8 602 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 QRFPRQ96P65 431 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 ASB2Q96Q27 587 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 CPNE1Q99829 537 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 DCLK3Q9C098 648 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 NMRAL1Q9HBL8 299 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 PSME2Q9UL46 239 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 MAPRE3Q9UPY8 281 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 CES2O00748 559 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 CD3EAPO15446 510 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 ZBTB14O43829 449 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 CCR4P51679 360 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 MCL1Q07820 350 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 NECAB2Q7Z6G3 386 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 COLGALT1Q8NBJ5 622 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 AGO4Q9HCK5 861 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 DUSP12Q9UNI6 340 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 PDE4DIPQ5VU43 2346 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 H3BRB1 525 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 SGPL1O95470 568 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 HLA-DQA2P01906 255 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 FASP25445 335 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 CSHL1Q14406 222 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 FBXO39Q8N4B4 442 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 OR2W6PQ8NHA6 318 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 UGT2B28Q9BY64 529 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 TUT1Q9H6E5 874 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 KLHL1Q9NR64 748 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 ADPRHL2Q9NX46 363 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 ARHGAP28Q9P2N2 729 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 UBA2Q9UBT2 640 aaPredicted RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 TUFMP49411 452 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 TRIM25Q14258 630 aaKnown RBP11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 RASA2Q15283 850 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 GRIK4Q16099 956 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 FBXW10Q5XX13 1052 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 PDPK2PQ6A1A2 396 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 GMCL1Q96IK5 515 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 DLGAP2Q9P1A6 1054 aa11.41□□□□□ -0.58
CCDC144B-208ENST00000618081 ATG7O95352 703 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 JCHAINP01591 159 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 CD151P48509 253 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 CDH17Q12864 832 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 ZNHIT3Q15649 155 aaPredicted RBP11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 METTL7BQ6UX53 244 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 KRT73Q86Y46 540 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 TMEM121Q9BTD3 319 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 AP3M1Q9Y2T2 418 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 PNPLA6Q8IY17 1366 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 SPTLC1O15269 473 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 RGS14O43566 566 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 SGTAO43765 313 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 SPIDRQ14159 915 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 AGKQ53H12 422 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 COLGALT2Q8IYK4 626 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 LZTR1Q8N653 840 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 MSRAQ9UJ68 235 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 TRHDEQ9UKU6 1024 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 TAF6LQ9Y6J9 622 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 PPLO60437 1756 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 FOXN3O00409 490 aaPredicted RBP11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 UBDO15205 165 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 KRT33AO76009 404 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 LBPP18428 481 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 TLX1P31314 330 aaPredicted RBP11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 BCL2L1Q07817 233 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 FBXL19Q6PCT2 694 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 SPPL2AQ8TCT8 520 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms