RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 KYAT3Q6YP21 454 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 ADGRF2Q8IZF7 708 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 TRPM4Q8TD43 1214 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PPP2R3CQ969Q6 453 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 C18orf25Q96B23 403 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 CCDC97Q96F63 343 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 SPATA13Q96N96 652 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 NAT9Q9BTE0 207 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 HAPLN2Q9GZV7 340 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 RAB6CQ9H0N0 254 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 WDCPQ9H6R7 721 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 WDR55Q9H6Y2 383 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 ARHGEF38Q9NXL2 777 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 RNF181Q9P0P0 153 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PRKAG3Q9UGI9 489 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 UBQLN1Q9UMX0 589 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PCDHGC3Q9UN70 934 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 EFR3BQ9Y2G0 817 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 HBS1LQ9Y450 684 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 COL5A3P25940 1745 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 A0A1B0GUL6 1792 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 MYH4Q9Y623 1939 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 CNTNAP2Q9UHC6 1331 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 CLDN5O00501 218 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PEX1O43933 1283 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 VAPBO95292 243 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 CD4P01730 458 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 HOXC6P09630 235 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 EPHA3P29320 983 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 ADCYAP1R1P41586 468 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 SH3BGRP55822 239 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 YWHAHQ04917 246 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 CYLC2Q14093 348 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 RALGPS1Q5JS13 557 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF484Q5JVG2 852 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 BNC2Q6ZN30 1099 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 CDHR3Q6ZTQ4 885 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PTAR1Q7Z6K3 402 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 HPS6Q86YV9 775 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 NUP93Q8N1F7 819 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 ATPAF2Q8N5M1 289 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PDCD6IPQ8WUM4 868 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 AZIN2Q96A70 460 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 LRRC39Q96DD0 335 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PHF21BQ96EK2 531 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 MINDY3Q9H8M7 445 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 SARS2Q9NP81 518 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 RECQL4O94761 1208 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PIGNO95427 931 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 LGALS2P05162 132 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 ZBTB48P10074 688 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PGAM1P18669 254 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 SP100P23497 879 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 CNTFP26441 200 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF252P-AS1Q0IIN9 211 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PDAP1Q13442 181 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 MOGSQ13724 837 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 DGKDQ16760 1214 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 ANO7Q6IWH7 933 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PACS1Q6VY07 963 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PIGZQ86VD9 579 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 WDTC1Q8N5D0 677 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 FNIP1Q8TF40 1166 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 HASPINQ8TF76 798 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC7A6OSQ96CW6 309 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 PIWIL1Q96J94 861 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 OMDQ99983 421 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 NIFKQ9BYG3 293 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 COPS7BQ9H9Q2 264 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 NMRAL1Q9HBL8 299 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 KRT82Q9NSB4 513 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 DDX18Q9NVP1 670 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF358Q9NW07 568 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 SYBUQ9NX95 663 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 CLIC5Q9NZA1 410 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 STX18Q9P2W9 335 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 NUDT5Q9UKK9 219 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 SNX13Q9Y5W8 968 aa7.04□□□□□ -1.28
SYNPO2-206ENST00000610556 C2CD4BA6NLJ0 364 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 DDNO94850 711 aaPredicted RBP7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 SNUPNO95149 360 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 HMBSP08397 361 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC26A2P50443 739 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 ABCE1P61221 599 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC25A11Q02978 314 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 CSHL1Q14406 222 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 BTBD8Q5XKL5 378 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 KCNMB4Q86W47 210 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 KYQ8NBH2 561 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 PPHLN1Q8NEY8 458 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 CMASQ8NFW8 434 aaPredicted RBP7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 DENND1AQ8TEH3 1009 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 CLEC4CQ8WTT0 213 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 CERS2Q96G23 380 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 P2RY11Q96G91 374 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 GPR20Q99678 358 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 ECSITQ9BQ95 431 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 GOLGA2P5Q9HBQ8 144 aa7.03□□□□□ -1.28
SYNPO2-206ENST00000610556 IRAK4Q9NWZ3 460 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms