RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 A0A1W2PR77 199 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 LRRIQ3A6PVS8 624 aaPredicted RBP16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 MID1O15344 667 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 MAGEC1O60732 1142 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 VNN1O95497 513 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 C4BPAP04003 597 aaKnown RBP16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 RPN1P04843 607 aaKnown RBP16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 RXRGP48443 463 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 CCR5P51681 352 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 ERVPABLB-1P60509 514 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 AMPD3Q01432 767 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 CEBPZQ03701 1054 aaKnown RBP16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 CST6Q15828 149 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 PARD3BQ8TEW8 1205 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TAF4BQ92750 862 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TMX3Q96JJ7 454 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 DEPDC7Q96QD5 511 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 DUSP16Q9BY84 665 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 FAM117AQ9C073 453 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TFIP11Q9UBB9 837 aaKnown RBP16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 SERGEFQ9UGK8 458 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 FZD4Q9ULV1 537 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 NUMA1Q14980 2115 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 MGAQ8IWI9 3026 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 MYLKQ15746 1914 aa16.04■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 A0A087X0B3 334 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 VPS37CA5D8V6 355 aaPredicted RBP16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 WNT9AO14904 365 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 SDC3O75056 442 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 USP12O75317 370 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 YWHAGP61981 247 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 KCNJ12Q14500 433 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 KMT5BQ4FZB7 885 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 SND1Q7KZF4 910 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 OR14C36Q8NHC7 312 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 IMPG2Q9BZV3 1241 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 MTG2Q9H4K7 406 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 THSD1Q9NS62 852 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 NAV2Q8IVL1 2488 aa16.03■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 KNTC1P50748 2209 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3DA0A087WVF3 549 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3IA0A087WXS9 549 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3EA0A087X179 549 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3KA0A087X1G2 549 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3FA6NER0 549 aaPredicted RBP16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3LB9A6J9 549 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 SIGLEC6O43699 453 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 SIN3BO75182 1162 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 SLFN14P0C7P3 912 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3HP0C7X1 549 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 PIK3CAP42336 1068 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 ASPAP45381 313 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 EHHADHQ08426 723 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TRIP4Q15650 581 aaPredicted RBP16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 HNRNPA1L2Q32P51 320 aaKnown RBP16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 PROX2Q3B8N5 592 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3GQ6DHY5 549 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3CQ6IPX1 549 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 SPOPLQ6IQ16 392 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 KIAA0907Q7Z7F0 614 aaPredicted RBP16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 MMAAQ8IVH4 418 aaKnown RBP16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 C12orf56Q8IXR9 622 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TBC1D3Q8IZP1 549 aaPredicted RBP16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 ZNF557Q8N988 423 aaPredicted RBP16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 MFSD2AQ8NA29 543 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 PLEKHO2Q8TD55 490 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TWNKQ96RR1 684 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 POLR1BQ9H9Y6 1135 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 OLA1Q9NTK5 396 aaKnown RBP16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 IL17BQ9UHF5 180 aa16.02■□□□□ 0.16
NEDD8-MDP1-204ENST00000605847 TP53BP1Q12888 1972 aaPredicted RBP16.02■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 DXOO77932 396 aaKnown RBP16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 CD58P19256 250 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 SLC8A1P32418 973 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 LSSP48449 732 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 SLC8A3P57103 927 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 CLDN10P78369 228 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 SRSF1Q07955 248 aaKnown RBP eCLIP16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 INCA1Q0VD86 236 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 ZNF211Q13398 564 aaPredicted RBP16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 ADGRF1Q5T601 910 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 PPP1R26Q5T8A7 1209 aaPredicted RBP16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 NAPEPLDQ6IQ20 393 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 KANSL1Q7Z3B3 1105 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 PRPF39Q86UA1 669 aaKnown RBP16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 ZC3H3Q8IXZ2 948 aaKnown RBP16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 RNF139Q8WU17 664 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 SNRNP27Q8WVK2 155 aaKnown RBP16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 VCPIP1Q96JH7 1222 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 ABCG4Q9H172 646 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 KNL1Q8NG31 2342 aa16.01■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 ASS1P00966 412 aaKnown RBP16■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 ASLP04424 464 aa16■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 KRT10P13645 584 aa16■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 GOT1P17174 413 aa16■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 CD70P32970 193 aa16■□□□□ 0.15
NEDD8-MDP1-204ENST00000605847 PSMD8P48556 350 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms