RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 ZC3H10Q96K80 434 aaKnown RBP12.49□□□□□ -0.41
SHANK2-218ENST00000601538 GSDMCQ9BYG8 508 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 MUC3BQ9H195 1237 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 LRRC40Q9H9A6 602 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 MKLN1Q9UL63 735 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 PCDHGC5Q9Y5F6 944 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 MAGEB2O15479 319 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 SERPINE1P05121 402 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 CDK8P49336 464 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 SCNN1DP51172 638 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 DGKDQ16760 1214 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 AGKQ53H12 422 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 SFRP1Q8N474 314 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 SLC25A23Q9BV35 468 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 ZNF112Q9UJU3 913 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 CHKBQ9Y259 395 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 SMIM22K7EJ46 135 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 CAMK2GQ13555 558 aaPredicted RBP12.49□□□□□ -0.41
SHANK2-218ENST00000601538 ITFG1Q8TB96 612 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 EPS8L3Q8TE67 593 aaKnown RBP12.49□□□□□ -0.41
SHANK2-218ENST00000601538 TEKT5Q96M29 485 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
SHANK2-218ENST00000601538 OR14I1A6ND48 311 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 NTRK1P04629 796 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 HOXA13P31271 388 aaPredicted RBP12.49□□□□□ -0.41
SHANK2-218ENST00000601538 CCNIQ14094 377 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 PGS1Q32NB8 556 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 ZHX1-C8orf76Q96EF9 292 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 EIF2AK1Q9BQI3 630 aaKnown RBP12.49□□□□□ -0.41
SHANK2-218ENST00000601538 LDOC1O95751 146 aaPredicted RBP12.49□□□□□ -0.41
SHANK2-218ENST00000601538 CYP2C8P10632 490 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 ALX1Q15699 326 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 SLC13A5Q86YT5 568 aaPredicted RBP12.49□□□□□ -0.41
SHANK2-218ENST00000601538 NSUN6Q8TEA1 469 aaKnown RBP12.49□□□□□ -0.41
SHANK2-218ENST00000601538 KIF12Q96FN5 646 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 PRDM8Q9NQV8 689 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.49□□□□□ -0.414e-6■■■□□ 17
SHANK2-218ENST00000601538 TAS2R1Q9NYW7 299 aa12.49□□□□□ -0.41
SHANK2-218ENST00000601538 A0A0G2JPF8 293 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 CCDC189A1A4V9 331 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 HNRNPCL3B7ZW38 293 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 CAMTA2O94983 1202 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 HNRNPCL4P0DMR1 293 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 ARF5P84085 180 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 GRIK3Q13003 919 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 NCOA4Q13772 614 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 TMC2Q8TDI7 906 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 ELOVL6Q9H5J4 265 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 TMEM216Q9P0N5 145 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 COQ6Q9Y2Z9 468 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 ALG6Q9Y672 507 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 CACNA1CQ13936 2221 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 CCNCP24863 283 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 S100A2P29034 98 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 SKP1P63208 163 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 SPATA2LQ8IUW3 424 aaPredicted RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 FAM71DQ8N9W8 422 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 FEZF2Q8TBJ5 459 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 RUVBL2Q9Y230 463 aaKnown RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 STX16-NPEPL1H3BU86 382 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 STX16O14662 325 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 NCAM1P13591 858 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 GPD1P21695 349 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 F8A1P23610 371 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 CDC42P60953 191 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 TMEM132DQ14C87 1099 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 OTUD3Q5T2D3 398 aaPredicted RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 ERI1Q8IV48 349 aaKnown RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 PABPC5Q96DU9 382 aaKnown RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 TMEM9Q9P0T7 183 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 TSHRP16473 764 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 GALNT3Q14435 633 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 VN1R5Q7Z5H4 357 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 ZSWIM1Q9BR11 485 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 ABCB10Q9NRK6 738 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 PRPF19Q9UMS4 504 aaKnown RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 CRABP2P29373 138 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 SLC16A2P36021 539 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 SMIM11AP58511 58 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 GRM4Q14833 912 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 ZRANB3Q5FWF4 1079 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 CHPFQ8IZ52 775 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 MYO1HQ8N1T3 1032 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 ZNF420Q8TAQ5 688 aaPredicted RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 SLC38A2Q96QD8 506 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 CLCC1Q96S66 551 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 NT5C1AQ9BXI3 368 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 NUP214P35658 2090 aaPredicted RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 BBOX1O75936 387 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 NFX1Q12986 1120 aaKnown RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 FASTKQ14296 549 aaKnown RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 IPMKQ8NFU5 416 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 ACMSDQ8TDX5 336 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 CHORDC1Q9UHD1 332 aaPredicted RBP12.48□□□□□ -0.41
SHANK2-218ENST00000601538 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 PCSK2P16519 638 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 PCSK1P29120 753 aa12.48□□□□□ -0.41
SHANK2-218ENST00000601538 PIK3CGP48736 1102 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms