RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 DCUN1D2Q6PH85 259 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 WDR59Q6PJI9 974 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 STRADAQ7RTN6 431 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 ANKS1BQ7Z6G8 1248 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 ALYREFQ86V81 257 aaKnown RBP15.55■□□□□ 0.08
UPF1-202ENST00000594243 MFN1Q8IWA4 741 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 SFTPA1Q8IWL2 248 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 IL17RCQ8NAC3 791 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 FIBINQ8TAL6 211 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 ATRIPQ8WXE1 791 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 NELL1Q92832 810 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 TRIM11Q96F44 468 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 PRMT1Q99873 361 aaKnown RBP15.55■□□□□ 0.08
UPF1-202ENST00000594243 ADAM33Q9BZ11 813 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 ISCUQ9H1K1 167 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 ZSCAN32Q9NX65 697 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 STIM2Q9P246 746 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 CLEC4EQ9ULY5 219 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 PCDHGA2Q9Y5H1 932 aa15.55■□□□□ 0.08
UPF1-202ENST00000594243 TCRBV5S1A1TA0A578 114 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 H0Y626 953 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 NPC1O15118 1278 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 PAGE1O75459 146 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 KLF8O95600 359 aaPredicted RBP15.54■□□□□ 0.08
UPF1-202ENST00000594243 ADCY5O95622 1261 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 MYBL1P10243 752 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 TDGF1P13385 188 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 HNRNPLP14866 589 aaKnown RBP eCLIP15.54■□□□□ 0.08
UPF1-202ENST00000594243 NBL1P41271 181 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 RPS24P62847 133 aaKnown RBP15.54■□□□□ 0.08
UPF1-202ENST00000594243 AUHQ13825 339 aaKnown RBP15.54■□□□□ 0.08
UPF1-202ENST00000594243 CDO1Q16878 200 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 GEN1Q17RS7 908 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 RNF43Q68DV7 783 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 CFAP52Q8N1V2 620 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 CARNMT1Q8N4J0 409 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 CCDC33Q8N5R6 958 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 ALLCQ8N6M5 410 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 TXNDC5Q8NBS9 432 aaKnown RBP15.54■□□□□ 0.08
UPF1-202ENST00000594243 WFIKKN2Q8TEU8 576 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 C1orf74Q96LT6 269 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 PRICKLE1Q96MT3 831 aaPredicted RBP15.54■□□□□ 0.08
UPF1-202ENST00000594243 HAPLN3Q96S86 360 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 SIK2Q9H0K1 926 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 C2orf42Q9NWW7 574 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 ELOVL2Q9NXB9 296 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 HS3ST4Q9Y661 456 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 KIAA1549LQ6ZVL6 1849 aa15.54■□□□□ 0.08
UPF1-202ENST00000594243 CCDC163A0A0D9SF12 145 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 GJB6O95452 261 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 HLA-FP30511 346 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 NTSR1P30989 418 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 DGKEP52429 567 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 ZNF143P52747 638 aaPredicted RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 ATXN1P54253 815 aaKnown RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 MAMLD1Q13495 774 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 CDH18Q13634 790 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 ARID5BQ14865 1188 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 CRY1Q16526 586 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 C15orf59Q2T9L4 293 aaPredicted RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 PPP1R15BQ5SWA1 713 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 PLEKHA7Q6IQ23 1121 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 FBXL22Q6P050 247 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 LRRC31Q6UY01 552 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 KIAA0907Q7Z7F0 614 aaPredicted RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 LONP2Q86WA8 852 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 GAS2L3Q86XJ1 694 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 CNGA4Q8IV77 575 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 CHPFQ8IZ52 775 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 AHI1Q8N157 1196 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.53■□□□□ 0.08
UPF1-202ENST00000594243 ZBTB44Q8NCP5 570 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 CENPIQ92674 756 aaPredicted RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 RPRD1AQ96P16 312 aaPredicted RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 MCEEQ96PE7 176 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 DNAJC7Q99615 494 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 SEMA4AQ9H3S1 761 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 MRPL47Q9HD33 250 aaKnown RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 POLMQ9NP87 494 aaPredicted RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 ABCB8Q9NUT2 735 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 FAM86C1Q9NVL1 165 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 KIAA1522Q9P206 1035 aaPredicted RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 ARHGAP20Q9P2F6 1191 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 CNOT8Q9UFF9 292 aaKnown RBP15.53■□□□□ 0.08
UPF1-202ENST00000594243 GGA2Q9UJY4 613 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 SCINQ9Y6U3 715 aa15.53■□□□□ 0.08
UPF1-202ENST00000594243 MYOFQ9NZM1 2061 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 ANTXRLA6NF34 631 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 SGK1O00141 431 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 AP5Z1O43299 807 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 ALDH1A2O94788 518 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 LUC7L3O95232 432 aaKnown RBP15.52■□□□□ 0.08
UPF1-202ENST00000594243 APBB3O95704 486 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 PLEKP08567 350 aaPredicted RBP15.52■□□□□ 0.08
UPF1-202ENST00000594243 PABPC1P11940 636 aaKnown RBP15.52■□□□□ 0.08
UPF1-202ENST00000594243 CNR2P34972 360 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 OXCT1P55809 520 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 RPL7AP62424 266 aaKnown RBP15.52■□□□□ 0.08
UPF1-202ENST00000594243 SLC12A1Q13621 1099 aa15.52■□□□□ 0.08
UPF1-202ENST00000594243 SH3PXD2AQ5TCZ1 1133 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms