RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 XXYLT1Q8NBI6 393 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 ZNF248Q8NDW4 579 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 WBP1Q96G27 269 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 CCDC34Q96HJ3 373 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 SLC2A11Q9BYW1 496 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 CLSTN2Q9H4D0 955 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 VRTNQ9H8Y1 702 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 FBRSQ9HAH7 460 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 PRSS16Q9NQE7 514 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 GDF3Q9NR23 364 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 SERTAD1Q9UHV2 236 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 HOOK1Q9UJC3 728 aaKnown RBP8.94□□□□□ -0.98
SDF2-204ENST00000587338 HPSEQ9Y251 543 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 NCKAP1Q9Y2A7 1128 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 LRRK2Q5S007 2527 aa8.94□□□□□ -0.98
SDF2-204ENST00000587338 A0A087X0B3 334 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 SLC12A8A0AV02 714 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 EIF3DO15371 548 aaKnown RBP eCLIP8.93□□□□□ -0.98
SDF2-204ENST00000587338 TGFB1I1O43294 461 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 WISP1O95388 367 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 KRT10P13645 584 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 P4HA1P13674 534 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 CKMT2P17540 419 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 TRIM21P19474 475 aaKnown RBP8.93□□□□□ -0.98
SDF2-204ENST00000587338 HOXD9P28356 352 aaPredicted RBP8.93□□□□□ -0.98
SDF2-204ENST00000587338 CD38P28907 300 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 HLA-FP30511 346 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 AFMP43652 599 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 PSEN1P49768 467 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 KIF11P52732 1056 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 INSM1Q01101 510 aaPredicted RBP8.93□□□□□ -0.98
SDF2-204ENST00000587338 BNIP3Q12983 259 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 BMT2Q1RMZ1 405 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 PKDCCQ504Y2 493 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 NCEH1Q6PIU2 408 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 CHST9Q7L1S5 443 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 CCDC186Q7Z3E2 898 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 PRICKLE2Q7Z3G6 844 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 UNC93AQ86WB7 457 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 CRYBG2Q8N1P7 616 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 CPXM2Q8N436 756 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 DCBLD1Q8N8Z6 715 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 IQUBQ8NA54 791 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 PLEKHO2Q8TD55 490 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 WFIKKN2Q8TEU8 576 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 GOLGA1Q92805 767 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 CDK5RAP1Q96SZ6 601 aaKnown RBP8.93□□□□□ -0.98
SDF2-204ENST00000587338 HNRNPABQ99729 332 aaKnown RBP8.93□□□□□ -0.98
SDF2-204ENST00000587338 PABPC3Q9H361 631 aaKnown RBP8.93□□□□□ -0.98
SDF2-204ENST00000587338 MTG2Q9H4K7 406 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 PNPLA8Q9NP80 782 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 ABCB8Q9NUT2 735 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 FBXL12Q9NXK8 326 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 MARCH2Q9P0N8 246 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 SERGEFQ9UGK8 458 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 ADAMTS1Q9UHI8 967 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 GGA2Q9UJY4 613 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 STRIP2Q9ULQ0 834 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 PCDHB1Q9Y5F3 818 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 PLXNA2O75051 1894 aa8.93□□□□□ -0.98
SDF2-204ENST00000587338 TLN1Q9Y490 2541 aaKnown RBP8.93□□□□□ -0.98
SDF2-204ENST00000587338 ARID1BQ8NFD5 2236 aaPredicted RBP8.92□□□□□ -0.98
SDF2-204ENST00000587338 FAM237AA0A1B0GTK4 181 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 A0A1W2PP55 124 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 A0A1W2PR77 199 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 LRRC72A6NJI9 287 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 LRRIQ3A6PVS8 624 aaPredicted RBP8.92□□□□□ -0.98
SDF2-204ENST00000587338 WNT9AO14904 365 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 EXOC3O60645 756 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 VNN1O95497 513 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 MPOP05164 745 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 DLDP09622 509 aaKnown RBP8.92□□□□□ -0.98
SDF2-204ENST00000587338 PABPC1P11940 636 aaKnown RBP8.92□□□□□ -0.98
SDF2-204ENST00000587338 GALCP54803 685 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 NXPH1P58417 271 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 ASIC1P78348 528 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 MPPE1Q53F39 396 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 FAM26FQ5R3K3 315 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 SASS6Q6UVJ0 657 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 KRBA2Q6ZNG9 492 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 USP30Q70CQ3 517 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 EPM2AIP1Q7L775 607 aaPredicted RBP8.92□□□□□ -0.98
SDF2-204ENST00000587338 ADIPOR2Q86V24 386 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 LURAP1LQ8IV03 231 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 DHX40Q8IX18 779 aaKnown RBP8.92□□□□□ -0.98
SDF2-204ENST00000587338 ZC3H3Q8IXZ2 948 aaKnown RBP8.92□□□□□ -0.98
SDF2-204ENST00000587338 AHI1Q8N157 1196 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 ZNF507Q8TCN5 953 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 KCNE4Q8WWG9 221 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 RFFLQ8WZ73 363 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 ERCC4Q92889 916 aaPredicted RBP8.92□□□□□ -0.98
SDF2-204ENST00000587338 CYFIP2Q96F07 1278 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 SERAC1Q96JX3 654 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 TIGD1Q96MW7 591 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 TWNKQ96RR1 684 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 EBF2Q9HAK2 575 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 CLIC5Q9NZA1 410 aa8.92□□□□□ -0.98
SDF2-204ENST00000587338 USP9XQ93008 2570 aaPredicted RBP8.91□□□□□ -0.98
SDF2-204ENST00000587338 TLR4O00206 839 aa8.91□□□□□ -0.98
SDF2-204ENST00000587338 MID1O15344 667 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms