RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ZNF518BQ9C0D4 1074 aa8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 SSU72Q9NP77 194 aaKnown RBP8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 TMEM9BQ9NQ34 198 aa8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 RBAKQ9NYW8 714 aaPredicted RBP8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 REV1Q9UBZ9 1251 aa8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 TJP2Q9UDY2 1190 aa8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 PCOLCE2Q9UKZ9 415 aa8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 PPT2Q9UMR5 302 aa8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 CPQQ9Y646 472 aa8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 CABIN1Q9Y6J0 2220 aa8.38□□□□□ -1.07
PPP4R1-225ENST00000583438 A0A1W2PQF6 199 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 FOXD2O60548 495 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 DNAJA2O60884 412 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 ATG13O75143 517 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 TBCAO75347 108 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 GJB3O75712 270 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 RHOBTB1O94844 696 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 KAT7O95251 611 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 IL18RAPO95256 599 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 ATE1O95260 518 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 CEACAM1P13688 526 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 CD59P13987 128 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 GABRG2P18507 467 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 HDCP19113 662 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 CSRP1P21291 193 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 CASP1P29466 404 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 DNAJA1P31689 397 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 UBA7P41226 1012 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 WASP42768 502 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 MAGEA11P43364 429 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 DHPSP49366 369 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 SLC7A9P82251 487 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 SMARCB1Q12824 385 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 TAF10Q12962 218 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 RESTQ13127 1097 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 SEMA3BQ13214 749 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 TAF12Q16514 161 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 NFE2Q16621 373 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 TRIM61Q5EBN2 209 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 MDH1BQ5I0G3 518 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 CC2D1AQ6P1N0 951 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 SEZ6L2Q6UXD5 910 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 TTC30AQ86WT1 665 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 MARCH9Q86YJ5 346 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 TOP6BLQ8N6T0 577 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 ZMIZ2Q8NF64 920 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 SCAMP5Q8TAC9 235 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 HMGB4Q8WW32 186 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 ZCCHC14Q8WYQ9 949 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 SEC16BQ96JE7 1060 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 SPATA17Q96L03 361 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 YIPF2Q9BWQ6 316 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 B3GNT5Q9BYG0 378 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 SDCBP2Q9H190 292 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 XYLT2Q9H1B5 865 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 INTS13Q9NVM9 706 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 CFAP97Q9P2B7 532 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 HMGXB4Q9UGU5 601 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 PILRBQ9UKJ0 227 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 ITGA11Q9UKX5 1188 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 SHROOM3Q8TF72 1996 aa8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 GOLGA4Q13439 2230 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-225ENST00000583438 FAM95CA0A1B0GW59 222 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 TCRBV21S2A2A0A5A6 115 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 TGFB1I1O43294 461 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 COCHO43405 550 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 SLC26A4O43511 780 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 BEST1O76090 585 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 GCNT3O95395 438 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 KRT18P05783 430 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 KRT19P08727 400 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 WARSP23381 471 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 LONP1P36776 959 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 CASP4P49662 377 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 RPL10AP62906 217 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 POU5F1Q01860 360 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 BNC1Q01954 994 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 ARID5AQ03989 594 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 SLBPQ14493 270 aaKnown RBP eCLIP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 KCNB1Q14721 858 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 NFKBIBQ15653 356 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 TMEM201Q5SNT2 666 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 LY6G5CQ5SRR4 150 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 EGFLAMQ63HQ2 1017 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 CCDC81Q6ZN84 652 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 TOGARAM2Q6ZUX3 1019 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 GPRIN1Q7Z2K8 1008 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 SPATA2LQ8IUW3 424 aaPredicted RBP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 HID1Q8IV36 788 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 BBS7Q8IWZ6 715 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 TMEM86AQ8N2M4 240 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 CHCHD4Q8N4Q1 142 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 NAT16Q8N8M0 369 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 HVCN1Q96D96 273 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 CALML4Q96GE6 196 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 FUBP3Q96I24 572 aaKnown RBP eCLIP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 HPDLQ96IR7 371 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 BBC3Q96PG8 261 aaPredicted RBP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 KCNK16Q96T55 309 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 PANK2Q9BZ23 570 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms