RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ATP5BP06576 529 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 CDK4P11802 303 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 POLR2EP19388 210 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 GCLMP48507 274 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 HARS2P49590 506 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 TKTL1P51854 596 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 ATMQ13315 3056 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 TAF1BQ53T94 588 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 RAB41Q5JT25 222 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 CEP135Q66GS9 1140 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 SLC9A9Q8IVB4 645 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 DHX40Q8IX18 779 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 SPACA3Q8IXA5 215 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 GRAMD1CQ8IYS0 662 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 AHI1Q8N157 1196 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 GOLGA5Q8TBA6 731 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 TMC2Q8TDI7 906 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 TAS1R2Q8TE23 839 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 EDEM1Q92611 657 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 GOLGA1Q92805 767 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 SKA1Q96BD8 255 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 MYO19Q96H55 970 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 ULBP1Q9BZM6 244 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 UBXN6Q9BZV1 441 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 MMRN2Q9H8L6 949 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 CYP3A43Q9HB55 503 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 GDF3Q9NR23 364 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 TLR4O00206 839 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 KLRC4O43908 158 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 TBL1XO60907 577 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 PPP6R2O75170 966 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 RNASEH2AO75792 299 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 ZBED1O96006 694 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 NR3C1P04150 777 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 GLDCP23378 1020 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 EPHA8P29322 1005 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 ACTN2P35609 894 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 INSM1Q01101 510 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 PPP3CAQ08209 521 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 PDE4CQ08493 712 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 KCNH2Q12809 1159 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 ADGRF1Q5T601 910 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 PM20D1Q6GTS8 502 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 RFWD3Q6PCD5 774 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 KDM7AQ6ZMT4 941 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 USP30Q70CQ3 517 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 BHLHA9Q7RTU4 235 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 ERICH1Q86X53 443 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 MMAAQ8IVH4 418 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 ARHGAP18Q8N392 663 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 KIAA0895Q8NCT3 520 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 OMDQ99983 421 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 BACH2Q9BYV9 841 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 SEMA4CQ9C0C4 833 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 KCTD10Q9H3F6 313 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 FBRSQ9HAH7 460 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 STIM2Q9P246 746 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 STOML2Q9UJZ1 356 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 CLCA2Q9UQC9 943 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 TP53BP1Q12888 1972 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 COL5A1P20908 1838 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 ARID1BQ8NFD5 2236 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 MAST4O15021 2626 aa10.53□□□□□ -0.72
NPLOC4-220ENST00000576940 LRRC72A6NJI9 287 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 MSI1O43347 362 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 CUTAO60888 179 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 TRIM49P0CI25 452 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 TRIM49CP0CI26 452 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 PDIA4P13667 645 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 CKMT2P17540 419 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 SLC6A4P31645 630 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 SLC8A1P32418 973 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 ARRB1P49407 418 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 VAMP7P51809 220 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 RAD23BP54727 409 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 NXPH1P58417 271 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 CST6Q15828 149 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 TBC1D25Q3MII6 688 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 C9orf64Q5T6V5 341 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 ARHGAP40Q5TG30 622 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 PIK3R6Q5UE93 754 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 BSPRYQ5W0U4 402 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 SPATS2Q86XZ4 545 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 ANKRD52Q8NB46 1076 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 SLC4A11Q8NBS3 891 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 OR2T34Q8NGX1 318 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 RNF139Q8WU17 664 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 TMEM174Q8WUU8 243 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 MYEOVQ96EZ4 313 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 SERAC1Q96JX3 654 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 LMLNQ96KR4 655 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 MRGPRX3Q96LB0 322 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 LGMNQ99538 433 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 NIF3L1Q9GZT8 377 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 ZSCAN16Q9H4T2 348 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 CPNE5Q9HCH3 593 aa10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 INTS6Q9UL03 887 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-220ENST00000576940 SCML1Q9UN30 329 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms