RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 A0A1W2PR77 199 aa13□□□□□ -0.33
SNX29-207ENST00000568949 LRRC72A6NJI9 287 aa13□□□□□ -0.33
SNX29-207ENST00000568949 BRINP1O60477 761 aa13□□□□□ -0.33
SNX29-207ENST00000568949 RNASEH1O60930 286 aaKnown RBP13□□□□□ -0.33
SNX29-207ENST00000568949 PPP6R2O75170 966 aa13□□□□□ -0.33
SNX29-207ENST00000568949 SLFN14P0C7P3 912 aa13□□□□□ -0.33
SNX29-207ENST00000568949 POLR2EP19388 210 aaKnown RBP13□□□□□ -0.33
SNX29-207ENST00000568949 SYT1P21579 422 aa13□□□□□ -0.33
SNX29-207ENST00000568949 CD38P28907 300 aa13□□□□□ -0.33
SNX29-207ENST00000568949 EPHA8P29322 1005 aaPredicted RBP13□□□□□ -0.33
SNX29-207ENST00000568949 RXRGP48443 463 aa13□□□□□ -0.33
SNX29-207ENST00000568949 STK38Q15208 465 aa13□□□□□ -0.33
SNX29-207ENST00000568949 TBC1D25Q3MII6 688 aa13□□□□□ -0.33
SNX29-207ENST00000568949 MPP7Q5T2T1 576 aa13□□□□□ -0.33
SNX29-207ENST00000568949 PM20D1Q6GTS8 502 aa13□□□□□ -0.33
SNX29-207ENST00000568949 NCEH1Q6PIU2 408 aa13□□□□□ -0.33
SNX29-207ENST00000568949 SPACA3Q8IXA5 215 aa13□□□□□ -0.33
SNX29-207ENST00000568949 ZC3H3Q8IXZ2 948 aaKnown RBP13□□□□□ -0.33
SNX29-207ENST00000568949 OXR1Q8N573 874 aa13□□□□□ -0.33
SNX29-207ENST00000568949 ZNF557Q8N988 423 aaPredicted RBP13□□□□□ -0.33
SNX29-207ENST00000568949 OR2T34Q8NGX1 318 aa13□□□□□ -0.33
SNX29-207ENST00000568949 GANCQ8TET4 914 aa13□□□□□ -0.33
SNX29-207ENST00000568949 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
SNX29-207ENST00000568949 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
SNX29-207ENST00000568949 ZSCAN16Q9H4T2 348 aaPredicted RBP13□□□□□ -0.33
SNX29-207ENST00000568949 ERVMER34-1Q9H9K5 563 aa13□□□□□ -0.33
SNX29-207ENST00000568949 EBF2Q9HAK2 575 aa13□□□□□ -0.33
SNX29-207ENST00000568949 UPF2Q9HAU5 1272 aaKnown RBP13□□□□□ -0.33
SNX29-207ENST00000568949 AASDHPPTQ9NRN7 309 aa13□□□□□ -0.33
SNX29-207ENST00000568949 FAM47DPA6NHR8 397 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 SPTLC2O15270 562 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 CKMT2P17540 419 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 GLDCP23378 1020 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 CCR5P51681 352 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 NXPH1P58417 271 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 CXADRP78310 365 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 RHDQ02161 417 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 SLC45A4Q5BKX6 768 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 C1orf220Q5T0J3 134 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 ADGRF1Q5T601 910 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 SFMBT2Q5VUG0 894 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 PIGZQ86VD9 579 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 ERICH1Q86X53 443 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 FMNL3Q8IVF7 1028 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 DCBLD1Q8N8Z6 715 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 HEXIM2Q96MH2 286 aaKnown RBP12.99□□□□□ -0.33
SNX29-207ENST00000568949 BLZF1Q9H2G9 400 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 APOBEC3GQ9HC16 384 aaKnown RBP12.99□□□□□ -0.33
SNX29-207ENST00000568949 ADAMTS1Q9UHI8 967 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 FZD4Q9ULV1 537 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 CLCA2Q9UQC9 943 aa12.99□□□□□ -0.33
SNX29-207ENST00000568949 TLR4O00206 839 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 ZBED1O96006 694 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 NR3C1P04150 777 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 CD58P19256 250 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 ACP1P24666 158 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 CASP1P29466 404 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 ST8SIA6P61647 398 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 KCNH2Q12809 1159 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 KCNJ12Q14500 433 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 ARID5BQ14865 1188 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 TAF1BQ53T94 588 aaPredicted RBP12.98□□□□□ -0.33
SNX29-207ENST00000568949 SHC4Q6S5L8 630 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 KANSL1Q7Z3B3 1105 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 TTC39CQ8N584 583 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 KDM1BQ8NB78 822 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 TTC17Q96AE7 1141 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 MYO19Q96H55 970 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 FAXDC2Q96IV6 333 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 NEUROG2Q9H2A3 272 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 KCTD10Q9H3F6 313 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 SERGEFQ9UGK8 458 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 FRMD4BQ9Y2L6 1034 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 TENM4Q6N022 2769 aa12.98□□□□□ -0.33
SNX29-207ENST00000568949 A0A1W2PP55 124 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 PDXKO00764 312 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 WNT9AO14904 365 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 MAPK13O15264 365 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 MID1O15344 667 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 POLR2DO15514 142 aaKnown RBP12.97□□□□□ -0.33
SNX29-207ENST00000568949 CUTAO60888 179 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 SIN3BO75182 1162 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 ASLP04424 464 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 CD70P32970 193 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 VAMP7P51809 220 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 TKTL1P51854 596 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 UCNP55089 124 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 SLC8A3P57103 927 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 E2F1Q01094 437 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 INSM1Q01101 510 aaPredicted RBP12.97□□□□□ -0.33
SNX29-207ENST00000568949 BNIP3Q12983 259 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 CST6Q15828 149 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 HNRNPA1L2Q32P51 320 aaKnown RBP12.97□□□□□ -0.33
SNX29-207ENST00000568949 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 ZNF394Q53GI3 561 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 ARHGAP17Q68EM7 881 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 BHLHA9Q7RTU4 235 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 MFSD2AQ8NA29 543 aa12.97□□□□□ -0.33
SNX29-207ENST00000568949 ANKRD52Q8NB46 1076 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms