RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SERPINB3P29508 390 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 RGS19P49795 217 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 SHC2P98077 582 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 STARD3Q14849 445 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 TWIST1Q15672 202 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 RINT1Q6NUQ1 792 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 WDR93Q6P2C0 686 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 GGT6Q6P531 493 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 MPLKIPQ8TAP9 179 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 MSI2Q96DH6 328 aaKnown RBP5.46□□□□□ -1.54
UBR1-205ENST00000564540 ZNF347Q96SE7 839 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 AAMDCQ9H7C9 122 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 SEMA4BQ9NPR2 832 aaPredicted RBP5.46□□□□□ -1.54
UBR1-205ENST00000564540 AGO2Q9UKV8 859 aaKnown RBP5.46□□□□□ -1.54
UBR1-205ENST00000564540 RAB21Q9UL25 225 aa5.46□□□□□ -1.54
UBR1-205ENST00000564540 TLX3O43711 291 aaPredicted RBP5.45□□□□□ -1.54
UBR1-205ENST00000564540 TULP3O75386 442 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 TNFRSF6BO95407 300 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 FGF2P09038 288 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 IFIT2P09913 472 aaKnown RBP5.45□□□□□ -1.54
UBR1-205ENST00000564540 SCP2P22307 547 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 IL6STP40189 918 aaPredicted RBP5.45□□□□□ -1.54
UBR1-205ENST00000564540 TECP42680 631 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 FOXG1P55316 489 aaPredicted RBP5.45□□□□□ -1.54
UBR1-205ENST00000564540 FAM3BP58499 235 aaPredicted RBP5.45□□□□□ -1.54
UBR1-205ENST00000564540 TAS2R50P59544 299 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 MAPK7Q13164 816 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 SLC39A5Q6ZMH5 540 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 TRABD2AQ86V40 505 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 PIM3Q86V86 326 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 ADGRF3Q8IZF5 1079 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 SRFBP1Q8NEF9 429 aaKnown RBP5.45□□□□□ -1.54
UBR1-205ENST00000564540 SVIPQ8NHG7 77 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 STYXQ8WUJ0 223 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 EME1Q96AY2 570 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 TMEM41AQ96HV5 264 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 MECRQ9BV79 373 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 EBF3Q9H4W6 596 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 ERVK-5Q9HDB9 667 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 ARFGAP3Q9NP61 516 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.45□□□□□ -1.54
UBR1-205ENST00000564540 UTS2RQ9UKP6 389 aa5.45□□□□□ -1.54
UBR1-205ENST00000564540 CD8B2A6NJW9 211 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 TRIM38O00635 465 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 KCNAB3O43448 404 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 NDUFB8O95169 186 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 SGPL1O95470 568 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 CRYABP02511 175 aaKnown RBP5.44□□□□□ -1.54
UBR1-205ENST00000564540 WNT1P04628 370 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 FOXL2P58012 376 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 RPL15P61313 204 aaKnown RBP5.44□□□□□ -1.54
UBR1-205ENST00000564540 BTKQ06187 659 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 SMTNL2Q2TAL5 461 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 MANEAQ5SRI9 462 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 SYCP2LQ5T4T6 812 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 SLC44A5Q8NCS7 719 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 ACRBPQ8NEB7 543 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 OR1N1Q8NGS0 311 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 NSMCE1Q8WV22 266 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 WDR60Q8WVS4 1066 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 SLC25A28Q96A46 364 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 REXO5Q96IC2 774 aaKnown RBP5.44□□□□□ -1.54
UBR1-205ENST00000564540 TP63Q9H3D4 680 aaPredicted RBP5.44□□□□□ -1.54
UBR1-205ENST00000564540 CCDC134Q9H6E4 229 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 THSD1Q9NS62 852 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 TRPC5Q9UL62 973 aaPredicted RBP5.44□□□□□ -1.54
UBR1-205ENST00000564540 PCDHA12Q9UN75 941 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 SLC12A4Q9UP95 1085 aa5.44□□□□□ -1.54
UBR1-205ENST00000564540 IGLV5-39A0A0G2JS06 123 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 TMEM272A0A1B0GTI8 110 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 B4DGG1 531 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 TOMM40O96008 361 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 TGM2P21980 687 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 BTBD16Q32M84 506 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 KIAA1755Q5JYT7 1200 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 NUGGCQ68CJ6 796 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 GATAD2AQ86YP4 633 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 CCDC146Q8IYE0 955 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 NRSN1Q8IZ57 195 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 EXD3Q8N9H8 876 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 OR52N4Q8NGI2 321 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 NLRP4Q96MN2 994 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 FAM234AQ9H0X4 552 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 OSBPL5Q9H0X9 879 aaPredicted RBP5.43□□□□□ -1.54
UBR1-205ENST00000564540 OBP2BQ9NPH6 170 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 MAGED2Q9UNF1 606 aaPredicted RBP5.43□□□□□ -1.54
UBR1-205ENST00000564540 ZBTB1Q9Y2K1 713 aa5.43□□□□□ -1.54
UBR1-205ENST00000564540 KIR2DS5A0A0G2JLQ3 304 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 FAM90A10PA6NDY2 464 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 A6NNC1 897 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 KIR2DS3K7RE56 304 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 INSIG1O15503 277 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 PRPF4O43172 522 aaKnown RBP eCLIP5.42□□□□□ -1.54
UBR1-205ENST00000564540 ATG13O75143 517 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 EPN2O95208 641 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 ALDOCP09972 364 aaKnown RBP5.42□□□□□ -1.54
UBR1-205ENST00000564540 SNHG28P0DPA3 235 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 IGFBP2P18065 325 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 TLE3Q04726 772 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 SPARCL1Q14515 664 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms