RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 E2F5Q15329 346 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 CCDC6Q16204 474 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 AHI1Q8N157 1196 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 CARNMT1Q8N4J0 409 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 FRMD1Q8N878 549 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 CD248Q9HCU0 757 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP31.85■■■□□ 2.69
CMTM4-204ENST00000563952 KCNU1A8MYU2 1149 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 M0QYT0 321 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 MAP3K13O43283 966 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 CHRNB2P17787 502 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 NDUFV2P19404 249 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 MATKP42679 507 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 FMO1Q01740 532 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 RNF43Q68DV7 783 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 CCDC117Q8IWD4 279 aaPredicted RBP31.84■■■□□ 2.69
CMTM4-204ENST00000563952 DDX51Q8N8A6 666 aaKnown RBP eCLIP31.84■■■□□ 2.69
CMTM4-204ENST00000563952 CYB5D2Q8WUJ1 264 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 SLC6A17Q9H1V8 727 aa31.84■■■□□ 2.69
CMTM4-204ENST00000563952 TEX33O43247 280 aa31.83■■■□□ 2.69
CMTM4-204ENST00000563952 CDH18Q13634 790 aa31.83■■■□□ 2.69
CMTM4-204ENST00000563952 BYSLQ13895 437 aaKnown RBP31.83■■■□□ 2.69
CMTM4-204ENST00000563952 SERPINA13PQ6UXR4 307 aa31.83■■■□□ 2.69
CMTM4-204ENST00000563952 ADIPOR2Q86V24 386 aa31.83■■■□□ 2.69
CMTM4-204ENST00000563952 ZNF557Q8N988 423 aaPredicted RBP31.83■■■□□ 2.69
CMTM4-204ENST00000563952 STAP1Q9ULZ2 295 aa31.83■■■□□ 2.69
CMTM4-204ENST00000563952 DYNC1LI1Q9Y6G9 523 aaKnown RBP31.83■■■□□ 2.69
CMTM4-204ENST00000563952 THADAQ6YHU6 1953 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 F5H5T6 163 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 SYNCRIPO60506 623 aaKnown RBP31.82■■■□□ 2.68
CMTM4-204ENST00000563952 PRKCHP24723 683 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 SULT1E1P49888 294 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 LMNB2Q03252 620 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 ENPP2Q13822 863 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 CSRP2Q16527 193 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 MAP7D1Q3KQU3 841 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 FNDC3BQ53EP0 1204 aaKnown RBP31.82■■■□□ 2.68
CMTM4-204ENST00000563952 PMS2CLQ68D20 193 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 MBLAC2Q68D91 279 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 MMS22LQ6ZRQ5 1243 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 KIAA0907Q7Z7F0 614 aaPredicted RBP31.82■■■□□ 2.68
CMTM4-204ENST00000563952 FIBINQ8TAL6 211 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 RTN4Q9NQC3 1192 aaKnown RBP31.82■■■□□ 2.68
CMTM4-204ENST00000563952 RRN3Q9NYV6 651 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 PLA2G4CQ9UP65 541 aa31.82■■■□□ 2.68
CMTM4-204ENST00000563952 ABCA7Q8IZY2 2146 aa31.81■■■□□ 2.68
CMTM4-204ENST00000563952 CYP1A1P04798 512 aaPredicted RBP31.81■■■□□ 2.68
CMTM4-204ENST00000563952 POLR2EP19388 210 aaKnown RBP31.81■■■□□ 2.68
CMTM4-204ENST00000563952 TFE3P19532 575 aaPredicted RBP31.81■■■□□ 2.68
CMTM4-204ENST00000563952 PTMSP20962 102 aa31.81■■■□□ 2.68
CMTM4-204ENST00000563952 SCNN1AP37088 669 aa31.81■■■□□ 2.68
CMTM4-204ENST00000563952 ID4P47928 161 aa31.81■■■□□ 2.68
CMTM4-204ENST00000563952 CREB5Q02930 508 aa31.81■■■□□ 2.68
CMTM4-204ENST00000563952 LMAN2Q12907 356 aa31.81■■■□□ 2.68
CMTM4-204ENST00000563952 FUT11Q495W5 492 aa31.81■■■□□ 2.68
CMTM4-204ENST00000563952 FILIP1LQ4L180 1135 aa31.81■■■□□ 2.68
CMTM4-204ENST00000563952 OTUD1Q5VV17 481 aaPredicted RBP31.81■■■□□ 2.68
CMTM4-204ENST00000563952 KIAA1324Q6UXG2 1013 aaKnown RBP31.81■■■□□ 2.68
CMTM4-204ENST00000563952 NPY6RQ99463 290 aa31.81■■■□□ 2.68
CMTM4-204ENST00000563952 MBD1Q9UIS9 605 aaPredicted RBP31.81■■■□□ 2.68
CMTM4-204ENST00000563952 H0Y626 953 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 LUC7L3O95232 432 aaKnown RBP31.8■■■□□ 2.68
CMTM4-204ENST00000563952 EPHX1P07099 455 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 MPLP40238 635 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 IQCB1Q15051 598 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 TRIM72Q6ZMU5 477 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 PRR23CQ6ZRP0 262 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 SLC30A5Q8TAD4 765 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 MRGPRX1Q96LB2 322 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 PRMT1Q99873 361 aaKnown RBP31.8■■■□□ 2.68
CMTM4-204ENST00000563952 ADAM33Q9BZ11 813 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 PIGVQ9NUD9 493 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 PCDHGA5Q9Y5G8 931 aa31.8■■■□□ 2.68
CMTM4-204ENST00000563952 PLXND1Q9Y4D7 1925 aa31.79■■■□□ 2.68
CMTM4-204ENST00000563952 ATP5BP06576 529 aaKnown RBP31.79■■■□□ 2.68
CMTM4-204ENST00000563952 HLA-EP13747 358 aa31.79■■■□□ 2.68
CMTM4-204ENST00000563952 DHPSP49366 369 aaPredicted RBP31.79■■■□□ 2.68
CMTM4-204ENST00000563952 FSCBQ5H9T9 825 aa31.79■■■□□ 2.68
CMTM4-204ENST00000563952 PHLDB2Q86SQ0 1253 aa31.79■■■□□ 2.68
CMTM4-204ENST00000563952 RMDN1Q96DB5 314 aa31.79■■■□□ 2.68
CMTM4-204ENST00000563952 LMLNQ96KR4 655 aa31.79■■■□□ 2.68
CMTM4-204ENST00000563952 PCDHB18PQ96TA0 734 aa31.79■■■□□ 2.68
CMTM4-204ENST00000563952 SMOC1Q9H4F8 434 aa31.79■■■□□ 2.68
CMTM4-204ENST00000563952 SEPT11Q9NVA2 429 aaKnown RBP31.79■■■□□ 2.68
CMTM4-204ENST00000563952 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa31.78■■■□□ 2.68
CMTM4-204ENST00000563952 FLT3P36888 993 aa31.78■■■□□ 2.68
CMTM4-204ENST00000563952 SND1Q7KZF4 910 aaKnown RBP eCLIP31.78■■■□□ 2.68
CMTM4-204ENST00000563952 LPCAT2Q7L5N7 544 aa31.78■■■□□ 2.68
CMTM4-204ENST00000563952 CIR1Q86X95 450 aaPredicted RBP31.78■■■□□ 2.68
CMTM4-204ENST00000563952 TMEFF1Q8IYR6 380 aa31.78■■■□□ 2.68
CMTM4-204ENST00000563952 TBCBQ99426 244 aa31.78■■■□□ 2.68
CMTM4-204ENST00000563952 C11orf70Q9BRQ4 267 aa31.78■■■□□ 2.68
CMTM4-204ENST00000563952 CYP8B1Q9UNU6 501 aa31.78■■■□□ 2.68
CMTM4-204ENST00000563952 MUC22E2RYF6 1773 aaPredicted RBP31.77■■■□□ 2.68
CMTM4-204ENST00000563952 DLDP09622 509 aaKnown RBP31.77■■■□□ 2.68
CMTM4-204ENST00000563952 MMP8P22894 467 aa31.77■■■□□ 2.68
CMTM4-204ENST00000563952 DEUP1Q05D60 604 aa31.77■■■□□ 2.68
CMTM4-204ENST00000563952 SF3A2Q15428 464 aaKnown RBP31.77■■■□□ 2.68
CMTM4-204ENST00000563952 PTPRNQ16849 979 aa31.77■■■□□ 2.68
CMTM4-204ENST00000563952 RSPO4Q2I0M5 234 aaPredicted RBP31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms