RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 NAMPTP43490 491 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 RARRES1P49788 294 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 CTTNQ14247 550 aaKnown RBP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 PDIA5Q14554 519 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 STAT4Q14765 748 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 ZNF630Q2M218 657 aaPredicted RBP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 SEZ6Q53EL9 994 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 JMJD6Q6NYC1 403 aaPredicted RBP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 PARS2Q7L3T8 475 aaKnown RBP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 RALYLQ86SE5 291 aaKnown RBP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 HRNRQ86YZ3 2850 aaPredicted RBP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 SCN4BQ8IWT1 228 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 SLFN12Q8IYM2 578 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 DEPTORQ8TB45 409 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 SORCS1Q8WY21 1168 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 DYDC2Q96IM9 177 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 ACO2Q99798 780 aaKnown RBP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 TCHPQ9BT92 498 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 EFHD1Q9BUP0 239 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 BOCQ9BWV1 1114 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 NEUROG2Q9H2A3 272 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 SLAMF7Q9NQ25 335 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 PRSS16Q9NQE7 514 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 FZD4Q9ULV1 537 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 DMTF1Q9Y222 760 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 CSNK1G3Q9Y6M4 447 aa11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
HDGFL3-204ENST00000563790 INTS1Q8N201 2190 aaKnown RBP11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 GREM1O60565 184 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 USO1O60763 962 aaKnown RBP11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 LYPLA2O95372 231 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 TCN2P20062 427 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 HTR1EP28566 365 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 RPIAP49247 311 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 GUCY2FP51841 1108 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 PMS2P54278 862 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 HNRNPKP61978 463 aaKnown RBP eCLIP11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 ZFP36L1Q07352 338 aaKnown RBP11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 SPAG1Q07617 926 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 WSCD1Q658N2 575 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 BNC2Q6ZN30 1099 aaPredicted RBP11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 DENND5BQ6ZUT9 1274 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 HTR3DQ70Z44 454 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 ANKS1BQ7Z6G8 1248 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 ZNF548Q8NEK5 533 aaPredicted RBP11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 NCOA7Q8NI08 942 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 STARD8Q92502 1023 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 NINJ1Q92982 152 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 PIWIL1Q96J94 861 aaKnown RBP11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 RSPH9Q9H1X1 276 aaPredicted RBP11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 SLKQ9H2G2 1235 aaPredicted RBP11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 EHD2Q9NZN4 543 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 ADAM21Q9UKJ8 722 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 PCDHA12Q9UN75 941 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 PCDHGA3Q9Y5H0 932 aa11.21□□□□□ -0.61
HDGFL3-204ENST00000563790 CYB561D2O14569 222 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 ABLIM1O14639 778 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 COCHO43405 550 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 TDP2O95551 362 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 F9P00740 461 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 PROZP22891 400 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 MAGEA11P43364 429 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 PPP2CBP62714 309 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 PPP2CAP67775 309 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 TMEM215Q68D42 235 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 PIK3AP1Q6ZUJ8 805 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 MAEAQ7L5Y9 396 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 PRPF39Q86UA1 669 aaKnown RBP11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 ZNF366Q8N895 744 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 MCPH1Q8NEM0 835 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 BHMTQ93088 406 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 GTF3C6Q969F1 213 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 KIAA1143Q96AT1 154 aaPredicted RBP11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 SNRNP40Q96DI7 357 aaKnown RBP11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 PKMYT1Q99640 499 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 CIPCQ9C0C6 399 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 PLEKHA5Q9HAU0 1116 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 ASF1BQ9NVP2 202 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 PLK2Q9NYY3 685 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 LUZP4Q9P127 313 aa11.2□□□□□ -0.62
HDGFL3-204ENST00000563790 A0A1W2PP55 124 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 A0A1W2PQM1 296 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 TTC26A0AVF1 554 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 TPP1O14773 563 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 XPOTO43592 962 aaKnown RBP11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 TIMM44O43615 452 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 RAD1O60671 282 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 HEXAP06865 529 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 CHMLP26374 656 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 MCM5P33992 734 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 NOS2P35228 1153 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 PGDP52209 483 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 PDE1AP54750 535 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 ADPRHP54922 357 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 ITGA1P56199 1179 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 TLE4Q04727 773 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 ECM1Q16610 540 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms