RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 COMTP21964 271 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 GJA4P35212 333 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 NRG1Q02297 640 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-207ENST00000563109 SMTNL2Q2TAL5 461 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 ZFYVE27Q5T4F4 411 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 FBXL22Q6P050 247 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 C1orf228Q6PIY5 440 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 TEKT4Q8WW24 435 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 HSPH1Q92598 858 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 EPAS1Q99814 870 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 HEBP1Q9NRV9 189 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.44■□□□□ 0.7
RAB40C-207ENST00000563109 OR12D3Q9UGF7 316 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 SNX10Q9Y5X0 201 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 ALG6Q9Y672 507 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 KIAA1549LQ6ZVL6 1849 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-207ENST00000563109 GFRA2O00451 464 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 DCXO43602 365 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 PENKP01210 267 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-207ENST00000563109 TCF4P15884 667 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 IL1R2P27930 398 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 ZXDAP98168 799 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 MLF2Q15773 248 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-207ENST00000563109 SLC44A4Q53GD3 710 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 MPP7Q5T2T1 576 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 FYB2Q5VWT5 728 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 POLNQ7Z5Q5 900 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 RALGPS2Q86X27 583 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-207ENST00000563109 CPNE8Q86YQ8 564 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 RHOT1Q8IXI2 618 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 ZNF557Q8N988 423 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-207ENST00000563109 KIAA1524Q8TCG1 905 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 TBC1D31Q96DN5 1066 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 ALS2CR12Q96Q35 445 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 ARHGEF3Q9NR81 526 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 GPATCH2LQ9NWQ4 482 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 STIM2Q9P246 746 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 WNT16Q9UBV4 365 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 CA14Q9ULX7 337 aa19.43■□□□□ 0.7
RAB40C-207ENST00000563109 MYOFQ9NZM1 2061 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 GRID2IPA4D2P6 1211 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 OTOL1A6NHN0 477 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-207ENST00000563109 SPECC1L-ADORA2AF8WAN1 911 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 PSTPIP1O43586 416 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 CREB3O43889 395 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 CACNG3O60359 315 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 SRGAP2O75044 1071 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 PALMO75781 387 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 RARAP10276 462 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 TNNT1P13805 278 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 HOXD9P28356 352 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-207ENST00000563109 L1CAMP32004 1257 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 CTHP32929 405 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 HTR7P34969 479 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 SOX9P48436 509 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 SGSHP51688 502 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 ZNF135P52742 658 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-207ENST00000563109 TAS2R40P59535 323 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 RPS24P62847 133 aaKnown RBP19.42■□□□□ 0.7
RAB40C-207ENST00000563109 PRKCQQ04759 706 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 KRT81Q14533 505 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 PREPLQ4J6C6 727 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-207ENST00000563109 ODF2Q5BJF6 829 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 KCNT1Q5JUK3 1230 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 TPRG1Q6ZUI0 275 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 CYP4V2Q6ZWL3 525 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-207ENST00000563109 C14orf80Q86SX3 495 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 CFAP52Q8N1V2 620 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 TRIM44Q96DX7 344 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-207ENST00000563109 SHDQ96IW2 340 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 GOLPH3Q9H4A6 298 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 PLK2Q9NYY3 685 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 PYCARDQ9ULZ3 195 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.42■□□□□ 0.7
RAB40C-207ENST00000563109 HYOU1Q9Y4L1 999 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 MIA3Q5JRA6 1907 aa19.42■□□□□ 0.7
RAB40C-207ENST00000563109 A0A1B0GVM2 712 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 GOLGA6L9A6NEM1 432 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 TCAF2A6NFQ2 919 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 MAN2B1O00754 1011 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 ALADP13716 330 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 EIF2DP41214 584 aaKnown RBP19.41■□□□□ 0.7
RAB40C-207ENST00000563109 TPI1P60174 286 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 CDH18Q13634 790 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 PPP6R3Q5H9R7 873 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-207ENST00000563109 LRRC38Q5VT99 294 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 RWDD4Q6NW29 188 aaKnown RBP19.41■□□□□ 0.7
RAB40C-207ENST00000563109 MFN1Q8IWA4 741 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 PYROXD2Q8N2H3 581 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 IGSF8Q969P0 613 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 ZYG11BQ9C0D3 744 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 DNAJC17Q9NVM6 304 aaKnown RBP19.41■□□□□ 0.7
RAB40C-207ENST00000563109 PPARGC1AQ9UBK2 798 aaKnown RBP19.41■□□□□ 0.7
RAB40C-207ENST00000563109 CAPN6Q9Y6Q1 641 aa19.41■□□□□ 0.7
RAB40C-207ENST00000563109 IGLV3-10A0A075B6K4 115 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 H0Y626 953 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 H3BRJ5 948 aa19.4■□□□□ 0.7
RAB40C-207ENST00000563109 EEF2KO00418 725 aaKnown RBP19.4■□□□□ 0.7
RAB40C-207ENST00000563109 CLDN11O75508 207 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms