RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TTBK1Q5TCY1 1321 aaPredicted RBP3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 CLIC1O00299 241 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 GRID2O43424 1007 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 CBFA2T3O75081 653 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 NDUFB8O95169 186 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 GLP2RO95838 553 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 SRGAP2BP0DMP2 458 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 PECAM1P16284 738 aaPredicted RBP3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 MMP8P22894 467 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 PBX1P40424 430 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 MLH1P40692 756 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 GSTM5P46439 218 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 JAK3P52333 1124 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 BFSP2Q13515 415 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 DNASE1L3Q13609 305 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 KEAP1Q14145 624 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 KCNJ12Q14500 433 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 ARHGAP15Q53QZ3 475 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 TMEM196Q5HYL7 178 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 FAM57BQ71RH2 274 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 ZNF329Q86UD4 541 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 RASGRP3Q8IV61 690 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 CLASRPQ8N2M8 674 aaKnown RBP3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 TMEM199Q8N511 208 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 BCAS4Q8TDM0 211 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 OVCA2Q8WZ82 227 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 KIAA1191Q96A73 305 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 EIF3CQ99613 913 aaKnown RBP3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 SCNM1Q9BWG6 230 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 STK33Q9BYT3 514 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 RBM38Q9H0Z9 239 aaKnown RBP3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 HELLSQ9NRZ9 838 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 RXFP3Q9NSD7 469 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 UNC13AQ9UPW8 1703 aa3.6□□□□□ -1.83
HDGFL3-202ENST00000562702 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 CCDC194A0A1B0GVG4 234 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 F8W810 466 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 TNFRSF13BO14836 293 aaPredicted RBP3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 FYB1O15117 783 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 PLA2G6O60733 806 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 PRAMEF2O60811 474 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 SLC3A2P08195 630 aaKnown RBP3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 ABCB4P21439 1286 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 MATN1P21941 496 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 GALNSP34059 522 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 TECP42680 631 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 WDR5P61964 334 aaKnown RBP3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 RAE1P78406 368 aaKnown RBP3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 EGR4Q05215 589 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 SEMA3BQ13214 749 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 STARD3Q14849 445 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 BRD3Q15059 726 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 RAB30Q15771 203 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 P3H1Q32P28 736 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 EARS2Q5JPH6 523 aaKnown RBP3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 SLC44A5Q8NCS7 719 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 PMM1Q92871 262 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 NEUROG1Q92886 237 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 RNF26Q9BY78 433 aaPredicted RBP3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 CD93Q9NPY3 652 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 VPS45Q9NRW7 570 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 ARL8BQ9NVJ2 186 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 FNIP2Q9P278 1114 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 SLC39A10Q9ULF5 831 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 PCDHA7Q9UN72 937 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 SPATA31A1Q5TZJ5 1347 aa3.59□□□□□ -1.83
HDGFL3-202ENST00000562702 TTC34A8MYJ7 566 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 ATF7P17544 494 aaPredicted RBP3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 DUSP1P28562 367 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 PPM1AP35813 382 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 IGHMBP2P38935 993 aaKnown RBP3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 POLD2P49005 469 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 SLC12A2P55011 1212 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 P2RX3P56373 397 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 LTBQ06643 244 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 SLC14A1Q13336 389 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 CBFBQ13951 182 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 UBE4AQ14139 1066 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 CSHL1Q14406 222 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 PTGR1Q14914 329 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 CNGA3Q16281 694 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 SYCP2LQ5T4T6 812 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 FAM90A2PQ658T7 463 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 NADSYN1Q6IA69 706 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 CCDC144NLQ6NUI1 221 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 XRRA1Q6P2D8 792 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 SLC39A5Q6ZMH5 540 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 KRT27Q7Z3Y8 459 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 SYTL1Q8IYJ3 562 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 MUL1Q969V5 352 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 MIB2Q96AX9 1013 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 TMEM41AQ96HV5 264 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 KAZALD1Q96I82 304 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 SAP30LQ9HAJ7 183 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 ABHD10Q9NUJ1 306 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 ANAPC4Q9UJX5 808 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 MAGED2Q9UNF1 606 aaPredicted RBP3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 COG5Q9UP83 839 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 LRCH1Q9Y2L9 728 aa3.58□□□□□ -1.84
HDGFL3-202ENST00000562702 UBE2J1Q9Y385 318 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms