RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PABPC3Q9H361 631 aaKnown RBP19.33■□□□□ 0.68
TPM1-226ENST00000560959 KLRC4O43908 158 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 CD58P19256 250 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 POLR2EP19388 210 aaKnown RBP19.32■□□□□ 0.68
TPM1-226ENST00000560959 CD38P28907 300 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 TKTL1P51854 596 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 ARID5BQ14865 1188 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 SHBQ15464 509 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 GATAD2AQ86YP4 633 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 FMNL3Q8IVF7 1028 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 ZNF843Q8N446 348 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 KDM1BQ8NB78 822 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 KIAA0895Q8NCT3 520 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 TAS1R2Q8TE23 839 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 ERVMER34-1Q9H9K5 563 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 FBXL12Q9NXK8 326 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 ADAMTS1Q9UHI8 967 aa19.32■□□□□ 0.68
TPM1-226ENST00000560959 TMEM131Q92545 1883 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 LRRC72A6NJI9 287 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 RNASEH1O60930 286 aaKnown RBP19.31■□□□□ 0.68
TPM1-226ENST00000560959 WNT1P04628 370 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 AFMP43652 599 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 RXRGP48443 463 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 ARRB1P49407 418 aaPredicted RBP19.31■□□□□ 0.68
TPM1-226ENST00000560959 CCR5P51681 352 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 MCCD1P59942 119 aaPredicted RBP19.31■□□□□ 0.68
TPM1-226ENST00000560959 DNAJC3Q13217 504 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 CEP135Q66GS9 1140 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 INTS8Q75QN2 995 aaKnown RBP19.31■□□□□ 0.68
TPM1-226ENST00000560959 ZC3H3Q8IXZ2 948 aaKnown RBP19.31■□□□□ 0.68
TPM1-226ENST00000560959 RFFLQ8WZ73 363 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 TTC17Q96AE7 1141 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 TMEM176AQ96HP8 235 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 SLC6A18Q96N87 628 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 GDF3Q9NR23 364 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 FAM13BQ9NYF5 915 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 FZD4Q9ULV1 537 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 TRAF3IP3Q9Y228 551 aa19.31■□□□□ 0.68
TPM1-226ENST00000560959 A0A1W2PR77 199 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 IRAK2O43187 625 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 CALUO43852 315 aaPredicted RBP19.3■□□□□ 0.68
TPM1-226ENST00000560959 NFIL3Q16649 462 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 HNRNPA1L2Q32P51 320 aaKnown RBP19.3■□□□□ 0.68
TPM1-226ENST00000560959 ZNF394Q53GI3 561 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 PRAMEF14Q5SWL7 426 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 HES3Q5TGS1 186 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 NCEH1Q6PIU2 408 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 BHLHA9Q7RTU4 235 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 OXR1Q8N573 874 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 SLC4A11Q8NBS3 891 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 OR2T34Q8NGX1 318 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 RNF139Q8WU17 664 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 EBF2Q9HAK2 575 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 EXOC1Q9NV70 894 aa19.3■□□□□ 0.68
TPM1-226ENST00000560959 PTPRQQ9UMZ3 2332 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 ASLP04424 464 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 PDIA4P13667 645 aaKnown RBP19.29■□□□□ 0.68
TPM1-226ENST00000560959 CKMT2P17540 419 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 EPHA8P29322 1005 aaPredicted RBP19.29■□□□□ 0.68
TPM1-226ENST00000560959 ACTN2P35609 894 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 GCLMP48507 274 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 ST8SIA6P61647 398 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 PPP3CAQ08209 521 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 PIK3R6Q5UE93 754 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 SCML4Q8N228 414 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 EID2Q8N6I1 236 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 GANCQ8TET4 914 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 AZIN2Q96A70 460 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 WBP1Q96G27 269 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 MYO19Q96H55 970 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 LMLNQ96KR4 655 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 ULBP1Q9BZM6 244 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 NEUROG2Q9H2A3 272 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 TMEM8AQ9HCN3 771 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 ABCC13Q9NSE7 274 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 MUC22E2RYF6 1773 aaPredicted RBP19.29■□□□□ 0.68
TPM1-226ENST00000560959 CFAP46Q8IYW2 2715 aa19.29■□□□□ 0.68
TPM1-226ENST00000560959 TARSL2A2RTX5 802 aaKnown RBP19.28■□□□□ 0.68
TPM1-226ENST00000560959 FAM47DPA6NHR8 397 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 CBX4O00257 560 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 XPO1O14980 1071 aaKnown RBP19.28■□□□□ 0.68
TPM1-226ENST00000560959 GTF2H1P32780 548 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 RAD23BP54727 409 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 TLE3Q04726 772 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 KCNJ12Q14500 433 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 CST6Q15828 149 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 KMT5BQ4FZB7 885 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 SLC45A4Q5BKX6 768 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 SFMBT2Q5VUG0 894 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 BSPRYQ5W0U4 402 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 UNC45BQ8IWX7 931 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 CEP57L1Q8IYX8 460 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 FIBINQ8TAL6 211 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 AASDHPPTQ9NRN7 309 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 CISHQ9NSE2 258 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 SFMBT1Q9UHJ3 866 aa19.28■□□□□ 0.68
TPM1-226ENST00000560959 ERVH48-1M5A8F1 160 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 TLR4O00206 839 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 KRT13P13646 458 aa19.27■□□□□ 0.68
TPM1-226ENST00000560959 CD70P32970 193 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms