RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ZNF394Q53GI3 561 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 C1orf220Q5T0J3 134 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 FMNL3Q8IVF7 1028 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 ARHGAP18Q8N392 663 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 LGMNQ99538 433 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 SEMA4CQ9C0C4 833 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 NEUROG2Q9H2A3 272 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 CLCA2Q9UQC9 943 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 MID1O15344 667 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 YKT6O15498 198 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 CKMT2P17540 419 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 PDCP20941 246 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 ARRB1P49407 418 aaPredicted RBP17.3■□□□□ 0.36
HERC1-207ENST00000560316 INSM1Q01101 510 aaPredicted RBP17.3■□□□□ 0.36
HERC1-207ENST00000560316 STK38Q15208 465 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 PIGZQ86VD9 579 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 IQUBQ8NA54 791 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 GOLGA5Q8TBA6 731 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 MYO19Q96H55 970 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 HEXIM2Q96MH2 286 aaKnown RBP17.3■□□□□ 0.36
HERC1-207ENST00000560316 CYP3A43Q9HB55 503 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 SFMBT1Q9UHJ3 866 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 SCML1Q9UN30 329 aa17.3■□□□□ 0.36
HERC1-207ENST00000560316 HECTD1Q9ULT8 2610 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 LRRC72A6NJI9 287 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 SIN3BO75182 1162 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 RNASEH2AO75792 299 aaKnown RBP17.29■□□□□ 0.36
HERC1-207ENST00000560316 POLR2EP19388 210 aaKnown RBP17.29■□□□□ 0.36
HERC1-207ENST00000560316 SYT1P21579 422 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
HERC1-207ENST00000560316 TKTL1P51854 596 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 NXPH1P58417 271 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 ILKQ13418 452 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 RAB41Q5JT25 222 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 KDM7AQ6ZMT4 941 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 DHX40Q8IX18 779 aaKnown RBP17.29■□□□□ 0.36
HERC1-207ENST00000560316 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 OR2T34Q8NGX1 318 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 TMC2Q8TDI7 906 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 SERAC1Q96JX3 654 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 CPNE5Q9HCH3 593 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 COL6A6A6NMZ7 2263 aa17.29■□□□□ 0.36
HERC1-207ENST00000560316 ARID1BQ8NFD5 2236 aaPredicted RBP17.28■□□□□ 0.36
HERC1-207ENST00000560316 TLR4O00206 839 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 AFMP43652 599 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 CUL4BQ13620 913 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 LY6DQ14210 128 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 CST6Q15828 149 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 ADGRF1Q5T601 910 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 ARHGAP40Q5TG30 622 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 SFMBT2Q5VUG0 894 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 RFWD3Q6PCD5 774 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 BHLHA9Q7RTU4 235 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 KANSL1Q7Z3B3 1105 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 SLC9A9Q8IVB4 645 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 MMAAQ8IVH4 418 aaKnown RBP17.28■□□□□ 0.36
HERC1-207ENST00000560316 DCBLD1Q8N8Z6 715 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 TAS1R2Q8TE23 839 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 RFFLQ8WZ73 363 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 OMDQ99983 421 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 ULBP1Q9BZM6 244 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 IMPG2Q9BZV3 1241 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 NIF3L1Q9GZT8 377 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 CLMPQ9H6B4 373 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 STOML2Q9UJZ1 356 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 PCDHB1Q9Y5F3 818 aa17.28■□□□□ 0.36
HERC1-207ENST00000560316 GOLGA6L7A0A1B0GV03 622 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 PVALEFA0A1B0GWK0 134 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 IKBKBO14920 756 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 SPTLC2O15270 562 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 MSI1O43347 362 aaKnown RBP17.27■□□□□ 0.36
HERC1-207ENST00000560316 TBL1XO60907 577 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 RNASEH1O60930 286 aaKnown RBP17.27■□□□□ 0.36
HERC1-207ENST00000560316 ZBED1O96006 694 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 NR3C1P04150 777 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 RXRGP48443 463 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 CCR5P51681 352 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 ZNF445P59923 1031 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 RHDQ02161 417 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 CUL4AQ13619 759 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 HNRNPA1L2Q32P51 320 aaKnown RBP17.27■□□□□ 0.36
HERC1-207ENST00000560316 CEP135Q66GS9 1140 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 SHC4Q6S5L8 630 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 SPATS2Q86XZ4 545 aaKnown RBP17.27■□□□□ 0.36
HERC1-207ENST00000560316 CACTIN-AS1Q8N1I8 211 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 FAM181AQ8N9Y4 354 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 ZNF248Q8NDW4 579 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 EDEM1Q92611 657 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 UBXN6Q9BZV1 441 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 OLA1Q9NTK5 396 aaKnown RBP17.27■□□□□ 0.36
HERC1-207ENST00000560316 ADAMTS1Q9UHI8 967 aa17.27■□□□□ 0.36
HERC1-207ENST00000560316 HBS1LQ9Y450 684 aaKnown RBP17.27■□□□□ 0.36
HERC1-207ENST00000560316 C10orf142B7Z368 130 aa17.26■□□□□ 0.35
HERC1-207ENST00000560316 TULP2O00295 520 aa17.26■□□□□ 0.35
HERC1-207ENST00000560316 POLR2DO15514 142 aaKnown RBP17.26■□□□□ 0.35
HERC1-207ENST00000560316 SDC3O75056 442 aa17.26■□□□□ 0.35
HERC1-207ENST00000560316 MT-CO3P00414 261 aa17.26■□□□□ 0.35
HERC1-207ENST00000560316 TRIM49P0CI25 452 aa17.26■□□□□ 0.35
HERC1-207ENST00000560316 TRIM49CP0CI26 452 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms