RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 FNTBP49356 437 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 TUBP50607 506 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 HADHBP55084 474 aaKnown RBP10.72□□□□□ -0.69
TPM1-212ENST00000558347 FMO1Q01740 532 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 NR1H3Q13133 447 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 TCEAL1Q15170 157 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 DNAJC21Q5F1R6 531 aaKnown RBP10.72□□□□□ -0.69
TPM1-212ENST00000558347 KDM7AQ6ZMT4 941 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 PEX26Q7Z412 305 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 KIAA1958Q8N8K9 716 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 LRRC45Q96CN5 670 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 HEXIM2Q96MH2 286 aaKnown RBP10.72□□□□□ -0.69
TPM1-212ENST00000558347 DUSP16Q9BY84 665 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 RASSF4Q9H2L5 321 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 NMUR1Q9HB89 426 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 PNPLA8Q9NP80 782 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 TLR8Q9NR97 1041 aaKnown RBP10.72□□□□□ -0.69
TPM1-212ENST00000558347 KIAA1257Q9ULG3 409 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 NFU1Q9UMS0 254 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 SMG5Q9UPR3 1016 aaKnown RBP10.72□□□□□ -0.69
TPM1-212ENST00000558347 SCML2Q9UQR0 700 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 GPR179Q6PRD1 2367 aa10.72□□□□□ -0.69
TPM1-212ENST00000558347 ATXN2Q99700 1313 aaKnown RBP10.72□□□□□ -0.69
TPM1-212ENST00000558347 MYOFQ9NZM1 2061 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 E2F8A0AVK6 867 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 TLR5O60602 858 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 IRF1P10914 325 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 CORO7P57737 925 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 MESP2Q0VG99 397 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 SRSF5Q13243 272 aaKnown RBP10.71□□□□□ -0.69
TPM1-212ENST00000558347 DHCR24Q15392 516 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 TTMPQ5BVD1 217 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 SPDYCQ5MJ68 293 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 HEATR6Q6AI08 1181 aaKnown RBP10.71□□□□□ -0.69
TPM1-212ENST00000558347 RHBDF2Q6PJF5 856 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 TRIM72Q6ZMU5 477 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 MAATS1Q7Z4T9 603 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 C12orf40Q86WS4 652 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 DDX42Q86XP3 938 aaKnown RBP eCLIP10.71□□□□□ -0.69
TPM1-212ENST00000558347 SPATS2Q86XZ4 545 aaKnown RBP10.71□□□□□ -0.69
TPM1-212ENST00000558347 RPLP0P6Q8NHW5 317 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 CCDC26Q8TAB7 109 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 RFFLQ8WZ73 363 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 HES6Q96HZ4 224 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 NAP1L3Q99457 506 aaPredicted RBP10.71□□□□□ -0.69
TPM1-212ENST00000558347 HINFPQ9BQA5 517 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 ACP6Q9NPH0 428 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 NUDT5Q9UKK9 219 aa10.71□□□□□ -0.69
TPM1-212ENST00000558347 SPTBN4Q9H254 2564 aa10.71□□□□□ -0.7
TPM1-212ENST00000558347 A0A1W2PQH9 124 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 SLC9A3R1O14745 358 aaPredicted RBP10.7□□□□□ -0.7
TPM1-212ENST00000558347 MDM4O15151 490 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 HRO43593 1189 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 CEP104O60308 925 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 GREM1O60565 184 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 CYP1A1P04798 512 aaPredicted RBP10.7□□□□□ -0.7
TPM1-212ENST00000558347 MMEP08473 750 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 VDRP11473 427 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 SLC6A11P48066 632 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 PXNP49023 591 aaPredicted RBP10.7□□□□□ -0.7
TPM1-212ENST00000558347 LPAL2Q16609 132 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 FBXO43Q4G163 708 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 ARHGAP17Q68EM7 881 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 PPP1R2P3Q6NXS1 205 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 SCD5Q86SK9 330 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 NT5DC3Q86UY8 548 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 LONP2Q86WA8 852 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 TTC30AQ86WT1 665 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 SFTPA1Q8IWL2 248 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 BBS7Q8IWZ6 715 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 KIAA2013Q8IYS2 634 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 ZNF606Q8WXB4 792 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 IFT81Q8WYA0 676 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 SEC14L1Q92503 715 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 PCDHB18PQ96TA0 734 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 KLF16Q9BXK1 252 aaPredicted RBP10.7□□□□□ -0.7
TPM1-212ENST00000558347 DNAI2Q9GZS0 605 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 CYLDQ9NQC7 956 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 AMFRQ9UKV5 643 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 PCDHGC3Q9UN70 934 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 SH3BP1Q9Y3L3 701 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 USP3Q9Y6I4 520 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 EML5Q05BV3 1969 aa10.7□□□□□ -0.7
TPM1-212ENST00000558347 K7EQS6 105 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 THAP12O43422 761 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 MED7O43513 233 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 ATG13O75143 517 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 RTN2O75298 545 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 UNGP13051 313 aaPredicted RBP10.69□□□□□ -0.7
TPM1-212ENST00000558347 RARGP13631 454 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 HOXA6P31267 233 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 GALCP54803 685 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 GNGT1P63211 74 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 STILQ15468 1287 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 CLEC16AQ2KHT3 1053 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 LY6G5CQ5SRR4 150 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 PRR23BQ6ZRT6 265 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 WDR5BQ86VZ2 330 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 ARFGAP2Q8N6H7 521 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 CTNNBL1Q8WYA6 563 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms