RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 MYL1P05976 194 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 SLFN14P0C7P3 912 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 NCAM1P13591 858 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 EIF2S3P41091 472 aaKnown RBP10.54□□□□□ -0.72
SCFD1-220ENST00000556486 MATKP42679 507 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 CSNK1EP49674 416 aaKnown RBP10.54□□□□□ -0.72
SCFD1-220ENST00000556486 SLC5A3P53794 718 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 RELBQ01201 579 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 SEMG2Q02383 582 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 ENPEPQ07075 957 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 ZNF699Q32M78 642 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 ZACNQ401N2 412 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 ZNF667Q5HYK9 610 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 WDR45BQ5MNZ6 344 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 DCAF12L1Q5VU92 463 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 GRAMD4Q6IC98 578 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 TPGS1Q6ZTW0 290 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 GLRX5Q86SX6 157 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 FAM124AQ86V42 546 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 UNC93AQ86WB7 457 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 ZNF843Q8N446 348 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 BAHD1Q8TBE0 780 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-220ENST00000556486 TAF4BQ92750 862 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 FBXO32Q969P5 355 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 KCTD10Q9H3F6 313 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 SMYD3Q9H7B4 428 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 CD248Q9HCU0 757 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 SLC39A2Q9NP94 309 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 SPHK2Q9NRA0 654 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 PLK2Q9NYY3 685 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 FAM8A1Q9UBU6 413 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
SCFD1-220ENST00000556486 CHORDC1Q9UHD1 332 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-220ENST00000556486 EIF2B4Q9UI10 523 aaKnown RBP10.54□□□□□ -0.72
SCFD1-220ENST00000556486 SH3BP1Q9Y3L3 701 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 MGAQ8IWI9 3026 aa10.54□□□□□ -0.72
SCFD1-220ENST00000556486 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-220ENST00000556486 PDXKO00764 312 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 MAPK13O15264 365 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-220ENST00000556486 KLRC4O43908 158 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 VNN1O95497 513 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 ASS1P00966 412 aaKnown RBP10.53□□□□□ -0.72
SCFD1-220ENST00000556486 P4HA1P13674 534 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 CD6P30203 668 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 PLA2G4AP47712 749 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 CASP4P49662 377 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 ST13P50502 369 aaKnown RBP10.53□□□□□ -0.72
SCFD1-220ENST00000556486 CDH8P55286 799 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 CUL4BQ13620 913 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 SGSM1Q2NKQ1 1148 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 SDE2Q6IQ49 451 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 KLHDC10Q6PID8 442 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 ZNF662Q6ZS27 426 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 HTR3DQ70Z44 454 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 ZNF276Q8N554 614 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 KIAA0895Q8NCT3 520 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 ZMIZ2Q8NF64 920 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 SCAMP5Q8TAC9 235 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 ITPKCQ96DU7 683 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 FCRL3Q96P31 734 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-220ENST00000556486 SDCBP2Q9H190 292 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 BLZF1Q9H2G9 400 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 FBXO44Q9H4M3 255 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 PIF1Q9H611 641 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-220ENST00000556486 PNPLA8Q9NP80 782 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 MARK1Q9P0L2 795 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 DKK4Q9UBT3 224 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 DMGDHQ9UI17 866 aaKnown RBP10.53□□□□□ -0.72
SCFD1-220ENST00000556486 PCDHA7Q9UN72 937 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 WASF2Q9Y6W5 498 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 NAV2Q8IVL1 2488 aa10.53□□□□□ -0.72
SCFD1-220ENST00000556486 CBX4O00257 560 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 BCAT2O15382 392 aaPredicted RBP10.52□□□□□ -0.73
SCFD1-220ENST00000556486 TLX3O43711 291 aaPredicted RBP10.52□□□□□ -0.73
SCFD1-220ENST00000556486 CACNG3O60359 315 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 TLR5O60602 858 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 PHACTR2O75167 634 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 STK10O94804 968 aaKnown RBP10.52□□□□□ -0.73
SCFD1-220ENST00000556486 CER1O95813 267 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 ZSCAN22P10073 491 aaPredicted RBP10.52□□□□□ -0.73
SCFD1-220ENST00000556486 KRT10P13645 584 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 CASP1P29466 404 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 PGFP49763 221 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 IDH3AP50213 366 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 INCA1Q0VD86 236 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 STK4Q13043 487 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 BIRC3Q13489 604 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 NFIL3Q16649 462 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 FUT11Q495W5 492 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 SV2AQ7L0J3 742 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 SMOQ99835 787 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 GABRG3Q99928 467 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 BBS2Q9BXC9 721 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 GRIP2Q9C0E4 1043 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 MKRN2Q9H000 416 aaKnown RBP10.52□□□□□ -0.73
SCFD1-220ENST00000556486 KRT82Q9NSB4 513 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 GMIPQ9P107 970 aa10.52□□□□□ -0.73
SCFD1-220ENST00000556486 RCOR1Q9UKL0 485 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms