RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PDE4CQ08493 712 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 INCA1Q0VD86 236 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 BNIP3Q12983 259 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 LY6DQ14210 128 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 PPP1R26Q5T8A7 1209 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-219ENST00000556432 FAM217AQ8IXS0 508 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 OR2T34Q8NGX1 318 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 RSPH9Q9H1X1 276 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-219ENST00000556432 ADAMTS1Q9UHI8 967 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 SCML1Q9UN30 329 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 TLR4O00206 839 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 CENPBP07199 599 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-219ENST00000556432 SLC8A3P57103 927 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 ZNF445P59923 1031 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 INSM1Q01101 510 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-219ENST00000556432 SLC39A14Q15043 492 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 STK38Q15208 465 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 ZACNQ401N2 412 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 ZNF394Q53GI3 561 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 UNC13DQ70J99 1090 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 SV2AQ7L0J3 742 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 MMAAQ8IVH4 418 aaKnown RBP14.51□□□□□ -0.09
ACTN1-219ENST00000556432 DHX40Q8IX18 779 aaKnown RBP14.51□□□□□ -0.09
ACTN1-219ENST00000556432 ZC3H3Q8IXZ2 948 aaKnown RBP14.51□□□□□ -0.09
ACTN1-219ENST00000556432 OXR1Q8N573 874 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.51□□□□□ -0.09
ACTN1-219ENST00000556432 DCBLD1Q8N8Z6 715 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 IQUBQ8NA54 791 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 RNF139Q8WU17 664 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 HEXIM2Q96MH2 286 aaKnown RBP14.51□□□□□ -0.09
ACTN1-219ENST00000556432 USP28Q96RU2 1077 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 SEMA4CQ9C0C4 833 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 NEUROG2Q9H2A3 272 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 BLZF1Q9H2G9 400 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 EBF2Q9HAK2 575 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 PPP4R2Q9NY27 417 aa14.51□□□□□ -0.09
ACTN1-219ENST00000556432 B8ZZF3 427 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 WNT9AO14904 365 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 SLC28A2O43868 658 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 SDC3O75056 442 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 SIN3BO75182 1162 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 MT-CO3P00414 261 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 MPOP05164 745 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 C6P13671 934 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 CASP1P29466 404 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 CD70P32970 193 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 PSMD8P48556 350 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 NXPH1P58417 271 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 DAB2P98082 770 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 EHHADHQ08426 723 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 KCNJ12Q14500 433 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 TRIP4Q15650 581 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-219ENST00000556432 CST6Q15828 149 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 E2F4Q16254 413 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 KMT5BQ4FZB7 885 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 HS1BP3Q53T59 392 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 ADGRF1Q5T601 910 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 OR14C36Q8NHC7 312 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 WBP1Q96G27 269 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 NIF3L1Q9GZT8 377 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 CYP3A43Q9HB55 503 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 OLA1Q9NTK5 396 aaKnown RBP14.5□□□□□ -0.09
ACTN1-219ENST00000556432 PCDHB1Q9Y5F3 818 aa14.5□□□□□ -0.09
ACTN1-219ENST00000556432 A0A1W2PR77 199 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 KLK10O43240 276 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 TBL1XO60907 577 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 ZBED1O96006 694 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 C7P10643 843 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 CCR5P51681 352 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 SGSHP51688 502 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 TKTL1P51854 596 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 GABREP78334 506 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 E2F1Q01094 437 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 SFMBT2Q5VUG0 894 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 CEP135Q66GS9 1140 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 CNNM4Q6P4Q7 775 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 RFWD3Q6PCD5 774 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 PRICKLE2Q7Z3G6 844 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 PIGZQ86VD9 579 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 MFN1Q8IWA4 741 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 CCDC150Q8NCX0 1101 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 WFDC5Q8TCV5 224 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 KCNE4Q8WWG9 221 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 RFFLQ8WZ73 363 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 NDRG1Q92597 394 aaKnown RBP14.49□□□□□ -0.09
ACTN1-219ENST00000556432 ZNF578Q96N58 590 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-219ENST00000556432 C7orf25Q9BPX7 421 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 MMRN2Q9H8L6 949 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 STIM2Q9P246 746 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 SFMBT1Q9UHJ3 866 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 FZD4Q9ULV1 537 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 HBS1LQ9Y450 684 aaKnown RBP14.49□□□□□ -0.09
ACTN1-219ENST00000556432 CEP83Q9Y592 693 aa14.49□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3DA0A087WVF3 549 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3IA0A087WXS9 549 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3EA0A087X179 549 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3KA0A087X1G2 549 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3FA6NER0 549 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-219ENST00000556432 TBC1D3LB9A6J9 549 aa14.48□□□□□ -0.09
ACTN1-219ENST00000556432 MSI1O43347 362 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms