RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 VANGL2Q9ULK5 521 aa14.76□□□□□ -0.05
CHD8-208ENST00000555301 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.76□□□□□ -0.05
CHD8-208ENST00000555301 GRID2IPA4D2P6 1211 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 E9PAM4 449 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 TRDMT1O14717 391 aaKnown RBP14.75□□□□□ -0.05
CHD8-208ENST00000555301 MOCS3O95396 460 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 RARAP10276 462 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 TYRP14679 529 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 TCF4P15884 667 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 HTR7P34969 479 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 GJA4P35212 333 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 GGCXP38435 758 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 ZXDAP98168 799 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 C5orf22Q49AR2 442 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 SLC44A4Q53GD3 710 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 KCNT1Q5JUK3 1230 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 CYP4V2Q6ZWL3 525 aaPredicted RBP14.75□□□□□ -0.05
CHD8-208ENST00000555301 RALGPS2Q86X27 583 aaPredicted RBP14.75□□□□□ -0.05
CHD8-208ENST00000555301 CCDC117Q8IWD4 279 aaPredicted RBP14.75□□□□□ -0.05
CHD8-208ENST00000555301 RHOT1Q8IXI2 618 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 TTC8Q8TAM2 541 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 PRICKLE1Q96MT3 831 aaPredicted RBP14.75□□□□□ -0.05
CHD8-208ENST00000555301 DHX35Q9H5Z1 703 aaKnown RBP14.75□□□□□ -0.05
CHD8-208ENST00000555301 RETREG1Q9H6L5 497 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 HEBP1Q9NRV9 189 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 PPARGC1AQ9UBK2 798 aaKnown RBP14.75□□□□□ -0.05
CHD8-208ENST00000555301 FBXL21Q9UKT6 434 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 PIAS3Q9Y6X2 628 aa14.75□□□□□ -0.05
CHD8-208ENST00000555301 IGLV3-10A0A075B6K4 115 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 GOLGA6L9A6NEM1 432 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 DRGXA6NNA5 263 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.74□□□□□ -0.05
CHD8-208ENST00000555301 SPECC1L-ADORA2AF8WAN1 911 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 MAN2B1O00754 1011 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 PSTPIP1O43586 416 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 DCXO43602 365 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 CACNG3O60359 315 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 TBL1XO60907 577 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 SRGAP2O75044 1071 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 PALMO75781 387 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 ALADP13716 330 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 HOXD9P28356 352 aaPredicted RBP14.74□□□□□ -0.05
CHD8-208ENST00000555301 CTHP32929 405 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 EIF2DP41214 584 aaKnown RBP14.74□□□□□ -0.05
CHD8-208ENST00000555301 TAS2R40P59535 323 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 RPS24P62847 133 aaKnown RBP14.74□□□□□ -0.05
CHD8-208ENST00000555301 PRKCQQ04759 706 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 MLF2Q15773 248 aaPredicted RBP14.74□□□□□ -0.05
CHD8-208ENST00000555301 DPYSL2Q16555 572 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 SMTNL2Q2TAL5 461 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 PREPLQ4J6C6 727 aaPredicted RBP14.74□□□□□ -0.05
CHD8-208ENST00000555301 HS1BP3Q53T59 392 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 MANEALQ5VSG8 457 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 C14orf80Q86SX3 495 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 CPNE8Q86YQ8 564 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 ZNF683Q8IZ20 524 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 LRRC57Q8N9N7 239 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 HSPH1Q92598 858 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 BHMTQ93088 406 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 IGSF8Q969P0 613 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 TBC1D31Q96DN5 1066 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 TRIM44Q96DX7 344 aaPredicted RBP14.74□□□□□ -0.05
CHD8-208ENST00000555301 SHDQ96IW2 340 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 ALS2CR12Q96Q35 445 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 SLC2A11Q9BYW1 496 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 ZYG11BQ9C0D3 744 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 ARHGEF3Q9NR81 526 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.74□□□□□ -0.05
CHD8-208ENST00000555301 GPATCH2LQ9NWQ4 482 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 PLK2Q9NYY3 685 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 PYCARDQ9ULZ3 195 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.74□□□□□ -0.05
CHD8-208ENST00000555301 HYOU1Q9Y4L1 999 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 SNX10Q9Y5X0 201 aa14.74□□□□□ -0.05
CHD8-208ENST00000555301 HELZP42694 1942 aaKnown RBP14.74□□□□□ -0.05
CHD8-208ENST00000555301 A0A1B0GVM2 712 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 TCAF2A6NFQ2 919 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 FAM72CH0Y354 149 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 CREB3O43889 395 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 CLDN11O75508 207 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 LRIG2O94898 1065 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 SOX9P48436 509 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 SGSHP51688 502 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 CDH4P55283 916 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 SEMA3BQ13214 749 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 KRT81Q14533 505 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 CA9Q16790 459 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 ODF2Q5BJF6 829 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 PPP6R3Q5H9R7 873 aaPredicted RBP14.73□□□□□ -0.05
CHD8-208ENST00000555301 ZFYVE27Q5T4F4 411 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 FAM72AQ5TYM5 149 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 RNF43Q68DV7 783 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 TXNRD3NBQ6F5E7 133 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 FAM72DQ6L9T8 149 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 RWDD4Q6NW29 188 aaKnown RBP14.73□□□□□ -0.05
CHD8-208ENST00000555301 CHST9Q7L1S5 443 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 PEX26Q7Z412 305 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 FAM72BQ86X60 149 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 MFN1Q8IWA4 741 aa14.73□□□□□ -0.05
CHD8-208ENST00000555301 MAP7D3Q8IWC1 876 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms