RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CHST9Q7L1S5 443 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 SMYD4Q8IYR2 804 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-208ENST00000553370 AHI1Q8N157 1196 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 CPXM2Q8N436 756 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 ZNF276Q8N554 614 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 PNPLA1Q8N8W4 532 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 CADM4Q8NFZ8 388 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 OR2T3Q8NH03 318 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 CYB5D2Q8WUJ1 264 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 SEMA4DQ92854 862 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 FAXDC2Q96IV6 333 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 ITM2CQ9NQX7 267 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 TM7SF3Q9NS93 570 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 ABCB8Q9NUT2 735 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 GGA2Q9UJY4 613 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 TSPAN16Q9UKR8 245 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 WASF3Q9UPY6 502 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 HPSEQ9Y251 543 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 HBS1LQ9Y450 684 aaKnown RBP10.34□□□□□ -0.75
ACTN1-208ENST00000553370 USP3Q9Y6I4 520 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 M0QYV0 167 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 SLC16A3O15427 465 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 MSI1O43347 362 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 RNASEH1O60930 286 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 FSBPO95073 299 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 ZNF202O95125 648 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 SMC2O95347 1197 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 ATP5BP06576 529 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 SETSIPP0DME0 302 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 POLR2EP19388 210 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 TBXAS1P24557 533 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 SLC11A2P49281 568 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 CETN1Q12798 172 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 CUL2Q13617 745 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 SUZ12Q15022 739 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 ARHGAP17Q68EM7 881 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 RAB44Q7Z6P3 723 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 ZNF366Q8N895 744 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 ZNF557Q8N988 423 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 UBA3Q8TBC4 463 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 NDRG1Q92597 394 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 TMA16Q96EY4 203 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 PIWIL1Q96J94 861 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 DDX50Q9BQ39 737 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 UBXN6Q9BZV1 441 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 CCDC86Q9H6F5 360 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 FBRSQ9HAH7 460 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 ABCC13Q9NSE7 274 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 SFMBT1Q9UHJ3 866 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 HOOK1Q9UJC3 728 aaKnown RBP10.33□□□□□ -0.76
ACTN1-208ENST00000553370 FBXO10Q9UK96 956 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 NCKAP1Q9Y2A7 1128 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 NFE2L3Q9Y4A8 694 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 ZFHX4Q86UP3 3567 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 IGSF10Q6WRI0 2623 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 ASXL3Q9C0F0 2248 aa10.33□□□□□ -0.76
ACTN1-208ENST00000553370 A0A1B0GVT2 93 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 A0A1W2PQ27 194 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 A0A1W2PQ64 194 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 FAM47DPA6NHR8 397 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 METTL12A8MUP2 240 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 KCNJ18B7U540 433 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 PIK3R2O00459 728 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 FLRT2O43155 660 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 TBL1XO60907 577 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 SEMA4FO95754 770 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 PABPC1P11940 636 aaKnown RBP10.32□□□□□ -0.76
ACTN1-208ENST00000553370 HOXD9P28356 352 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-208ENST00000553370 RGS7P49802 495 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 C21orf59P57076 290 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 NUCB2P80303 420 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 SFSWAPQ12872 951 aaKnown RBP10.32□□□□□ -0.76
ACTN1-208ENST00000553370 PNOCQ13519 176 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 CDH18Q13634 790 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 HLA-BQ31612 363 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 CCDC40Q4G0X9 1142 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 RAB41Q5JT25 222 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 ADGRF1Q5T601 910 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 RNF219Q5W0B1 726 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-208ENST00000553370 BSPRYQ5W0U4 402 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 NUGGCQ68CJ6 796 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 ZNF776Q68DI1 518 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-208ENST00000553370 LRSAM1Q6UWE0 723 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 MFN1Q8IWA4 741 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 RHBDD1Q8TEB9 315 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 DNASE2BQ8WZ79 361 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 NT5C1BQ96P26 610 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 CDC6Q99741 560 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 USB1Q9BQ65 265 aaKnown RBP10.32□□□□□ -0.76
ACTN1-208ENST00000553370 BTBD1Q9H0C5 482 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 PCED1AQ9H1Q7 454 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 CD248Q9HCU0 757 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 STIM2Q9P246 746 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 ARMCX3Q9UH62 379 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-208ENST00000553370 FNDC3AQ9Y2H6 1198 aaKnown RBP10.32□□□□□ -0.76
ACTN1-208ENST00000553370 PCDHB4Q9Y5E5 795 aa10.32□□□□□ -0.76
ACTN1-208ENST00000553370 TULP2O00295 520 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 MOCS3O95396 460 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 LATS1O95835 1130 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 ZNF883P0CG24 379 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms