RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ST8SIA6P61647 398 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 RPS14P62263 151 aaKnown RBP14.13□□□□□ -0.15
TROAP-211ENST00000549891 KIF19Q2TAC6 998 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 CBWD6Q4V339 395 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 CBWD3Q5JTY5 395 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 CBWD5Q5RIA9 395 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 ZNF776Q68DI1 518 aaPredicted RBP14.13□□□□□ -0.15
TROAP-211ENST00000549891 CCDC117Q8IWD4 279 aaPredicted RBP14.13□□□□□ -0.15
TROAP-211ENST00000549891 ZNF366Q8N895 744 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 BIRC7Q96CA5 298 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 DDX50Q9BQ39 737 aaKnown RBP14.13□□□□□ -0.15
TROAP-211ENST00000549891 TM9SF3Q9HD45 589 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 PRSS16Q9NQE7 514 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 DKK4Q9UBT3 224 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 SNX11Q9Y5W9 270 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 ITPR1Q14643 2758 aa14.13□□□□□ -0.15
TROAP-211ENST00000549891 PLXNA2O75051 1894 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 MSI1O43347 362 aaKnown RBP14.12□□□□□ -0.15
TROAP-211ENST00000549891 PCDHGA12O60330 932 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 TBL1XO60907 577 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 RNASEH1O60930 286 aaKnown RBP14.12□□□□□ -0.15
TROAP-211ENST00000549891 FSBPO95073 299 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 ATXN1LP0C7T5 689 aaKnown RBP14.12□□□□□ -0.15
TROAP-211ENST00000549891 LCP1P13796 627 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 DAOAP59103 153 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 FKBP3Q00688 224 aaKnown RBP14.12□□□□□ -0.15
TROAP-211ENST00000549891 PTPRNQ16849 979 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 PIK3R6Q5UE93 754 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 MSANTD2Q6P1R3 559 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 C19orf48Q6RUI8 117 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 USP30Q70CQ3 517 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 SMYD4Q8IYR2 804 aaPredicted RBP14.12□□□□□ -0.15
TROAP-211ENST00000549891 UBA3Q8TBC4 463 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 MDM1Q8TC05 714 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 IRGQQ8WZA9 623 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 AZIN2Q96A70 460 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 SKA1Q96BD8 255 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 TOR4AQ9NXH8 423 aa14.12□□□□□ -0.15
TROAP-211ENST00000549891 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.12□□□□□ -0.15
TROAP-211ENST00000549891 GOLGA8CPA6NN73 597 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 O00370 1275 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 IGLV3-27P01718 113 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 ASLP04424 464 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 PAEPP09466 180 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 C21orf59P57076 290 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 STILQ15468 1287 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 RFWD3Q6PCD5 774 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 LCLAT1Q6UWP7 414 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 PDZD3Q86UT5 571 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 MFN1Q8IWA4 741 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 HJURPQ8NCD3 748 aaPredicted RBP14.11□□□□□ -0.15
TROAP-211ENST00000549891 GANCQ8TET4 914 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 ACE2Q9BYF1 805 aaPredicted RBP14.11□□□□□ -0.15
TROAP-211ENST00000549891 GTPBP4Q9BZE4 634 aaKnown RBP14.11□□□□□ -0.15
TROAP-211ENST00000549891 RSPH9Q9H1X1 276 aaPredicted RBP14.11□□□□□ -0.15
TROAP-211ENST00000549891 SCUBE2Q9NQ36 999 aa14.11□□□□□ -0.15
TROAP-211ENST00000549891 NYNRINQ9P2P1 1898 aaKnown RBP14.11□□□□□ -0.15
TROAP-211ENST00000549891 ARMCX3Q9UH62 379 aaPredicted RBP14.11□□□□□ -0.15
TROAP-211ENST00000549891 COL5A1P20908 1838 aaPredicted RBP14.11□□□□□ -0.15
TROAP-211ENST00000549891 APC2O95996 2303 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 PAPSS1O43252 624 aaPredicted RBP14.1□□□□□ -0.15
TROAP-211ENST00000549891 ACSL4O60488 711 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 FBXO21O94952 628 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 LTFP02788 710 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 CD70P32970 193 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 PRCPP42785 496 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 CTSKP43235 329 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 SGSHP51688 502 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 TBX4P57082 545 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 RACK1P63244 317 aaKnown RBP14.1□□□□□ -0.15
TROAP-211ENST00000549891 LRRC63Q05C16 580 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 COL28A1Q2UY09 1125 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 PKDCCQ504Y2 493 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 COBLL1Q53SF7 1204 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 ZNF658Q5TYW1 1059 aaPredicted RBP14.1□□□□□ -0.15
TROAP-211ENST00000549891 KIAA0895LQ68EN5 471 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 TMEM270Q6UE05 265 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 KDM1BQ8NB78 822 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 FIBINQ8TAL6 211 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 SLC35F5Q8WV83 523 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 GSDMAQ96QA5 445 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 PABPC3Q9H361 631 aaKnown RBP14.1□□□□□ -0.15
TROAP-211ENST00000549891 GOLPH3LQ9H4A5 285 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 BTBD3Q9Y2F9 522 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 RAXQ9Y2V3 346 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 SLCO1B1Q9Y6L6 691 aa14.1□□□□□ -0.15
TROAP-211ENST00000549891 FASNP49327 2511 aaKnown RBP14.1□□□□□ -0.15
TROAP-211ENST00000549891 URB1O60287 2271 aaKnown RBP14.1□□□□□ -0.15
TROAP-211ENST00000549891 LRRC72A6NJI9 287 aa14.09□□□□□ -0.15
TROAP-211ENST00000549891 E9PAM4 449 aa14.09□□□□□ -0.15
TROAP-211ENST00000549891 H0Y8X5 98 aa14.09□□□□□ -0.15
TROAP-211ENST00000549891 VILLO15195 856 aa14.09□□□□□ -0.15
TROAP-211ENST00000549891 MOCS3O95396 460 aa14.09□□□□□ -0.15
TROAP-211ENST00000549891 CETN1Q12798 172 aa14.09□□□□□ -0.15
TROAP-211ENST00000549891 LRMPQ12912 555 aa14.09□□□□□ -0.15
TROAP-211ENST00000549891 CDH18Q13634 790 aa14.09□□□□□ -0.15
TROAP-211ENST00000549891 CNGA2Q16280 664 aa14.09□□□□□ -0.15
TROAP-211ENST00000549891 HNRNPA1L2Q32P51 320 aaKnown RBP14.09□□□□□ -0.15
TROAP-211ENST00000549891 FAM133BQ5BKY9 247 aaKnown RBP14.09□□□□□ -0.15
TROAP-211ENST00000549891 PMF1Q6P1K2 205 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms