RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 MRNIPQ6NTE8 343 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 KCNMB4Q86W47 210 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 NSMCE2Q96MF7 247 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 SLC25A23Q9BV35 468 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 IMPAD1Q9NX62 359 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 HIST1H2AGP0C0S8 130 aaPredicted RBP19.8■□□□□ 0.76
SUDS3-204ENST00000543473 CREB1P16220 341 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 HIST1H2ADP20671 130 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 CYP51A1Q16850 503 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 SV2CQ496J9 727 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 HIST1H2AHQ96KK5 128 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 HIST1H2AJQ99878 128 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 H2AFJQ9BTM1 129 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 MECRQ9BV79 373 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 CYP3A7-CYP3A51PA0A087WV96 503 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 LINC00854A0A1B0GVQ3 168 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 CYP3A4P08684 503 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 CYP3A7P24462 503 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 CAMK1DQ8IU85 385 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 KATNAL1Q9BW62 490 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 GBA2Q9HCG7 927 aaPredicted RBP19.8■□□□□ 0.76
SUDS3-204ENST00000543473 XPNPEP3Q9NQH7 507 aa19.8■□□□□ 0.76
SUDS3-204ENST00000543473 HMGCRP04035 888 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 CCDC130P13994 396 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 PSMB9P28065 219 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 CDC42EP1Q00587 391 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 GNASQ5JWF2 1037 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 LPCAT4Q643R3 524 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 RBM15BQ8NDT2 890 aaKnown RBP19.79■□□□□ 0.76
SUDS3-204ENST00000543473 ZFYVE19Q96K21 471 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 NDUFAF1Q9Y375 327 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 ADM5C9JUS6 153 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 VWA5AO00534 786 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 ADCY6O43306 1168 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 LGR5O75473 907 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 TPBGLP0DKB5 382 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 SPANXN3Q5MJ09 141 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 RSL24D1Q9UHA3 163 aaKnown RBP19.79■□□□□ 0.76
SUDS3-204ENST00000543473 RNF112Q9ULX5 631 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 R3HDM2Q9Y2K5 976 aaKnown RBP19.79■□□□□ 0.76
SUDS3-204ENST00000543473 TCRBV9S1A1TA0A576 114 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 TPH1P17752 444 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 DSG3P32926 999 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 TRIM69Q86WT6 500 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 SAMD3Q8N6K7 520 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 MAB21L3Q8N8X9 362 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 PCDHB18PQ96TA0 734 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 ITGB1BP2Q9UKP3 347 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 COG5Q9UP83 839 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 C15orf38-AP3S2A0A0A6YYH1 394 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 RGS4P49798 205 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 NAGLUP54802 743 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 IL5RAQ01344 420 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 BFSP2Q13515 415 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 PRMT9Q6P2P2 845 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 ARPINQ7Z6K5 226 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 STK32CQ86UX6 486 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 SLC22A9Q8IVM8 553 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 PAWRQ96IZ0 340 aaKnown RBP19.79■□□□□ 0.76
SUDS3-204ENST00000543473 ZBED2Q9BTP6 218 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 NDEL1Q9GZM8 345 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 SPATC1LQ9H0A9 340 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 TSPAN16Q9UKR8 245 aa19.79■□□□□ 0.76
SUDS3-204ENST00000543473 RPTORQ8N122 1335 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 SPATA31C1P0DKV0 1188 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 LRRC74AQ0VAA2 488 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 TJAP1Q5JTD0 557 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 FBXO16Q8IX29 292 aaPredicted RBP19.78■□□□□ 0.76
SUDS3-204ENST00000543473 MROH8Q9H579 483 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 TMCO1Q9UM00 188 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 LTN1O94822 1766 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 hCG_1818297A0A087WSY0 165 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 AMPD1P23109 780 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 NR2C2P49116 596 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 BCAT1P54687 386 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 RPL7AP62424 266 aaKnown RBP19.78■□□□□ 0.76
SUDS3-204ENST00000543473 NAB1Q13506 487 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 HYIQ5T013 277 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 BBS12Q6ZW61 710 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 CENPLQ8N0S6 344 aaPredicted RBP19.78■□□□□ 0.76
SUDS3-204ENST00000543473 RNPEPQ9H4A4 650 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 MAN1C1Q9NR34 630 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 PLA2G4CQ9UP65 541 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 CAB39Q9Y376 341 aaPredicted RBP19.78■□□□□ 0.76
SUDS3-204ENST00000543473 RGSL1A5PLK6 1076 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 RNF103O00237 685 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 TM7SF2O76062 418 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 SPATA2LQ8IUW3 424 aaPredicted RBP19.78■□□□□ 0.76
SUDS3-204ENST00000543473 URGCPQ8TCY9 931 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 FAM136AQ96C01 138 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 MBOAT7Q96N66 472 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 HMG20AQ9NP66 347 aa19.78■□□□□ 0.76
SUDS3-204ENST00000543473 MEIS2O14770 477 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 TOMM70O94826 608 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 FGRP09769 529 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 PTRHD1Q6GMV3 140 aaKnown RBP19.77■□□□□ 0.76
SUDS3-204ENST00000543473 RNF145Q96MT1 663 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 STN1Q9H668 368 aaKnown RBP19.77■□□□□ 0.76
SUDS3-204ENST00000543473 CHKBQ9Y259 395 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 EIF3LQ9Y262 564 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms