RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 GPD2P43304 727 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 RPL34P49207 117 aaKnown RBP13.62□□□□□ -0.23
RTN3-212ENST00000543123 UBE2HP62256 183 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 SIM1P81133 766 aaPredicted RBP13.62□□□□□ -0.23
RTN3-212ENST00000543123 DCAF12L1Q5VU92 463 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 RFWD3Q6PCD5 774 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 IL27RAQ6UWB1 636 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 GBP6Q6ZN66 633 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 CACUL1Q86Y37 369 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 SCUBE3Q8IX30 993 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 ZCCHC9Q8N567 271 aaKnown RBP13.62□□□□□ -0.23
RTN3-212ENST00000543123 CYB5D2Q8WUJ1 264 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 NOX5Q96PH1 765 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 ADAM33Q9BZ11 813 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 MIR1-1HGQ9H1L0 117 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 POPDC2Q9HBU9 364 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 FSCN3Q9NQT6 498 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 KIAA1468Q9P260 1216 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 TJP2Q9UDY2 1190 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 SLC12A6Q9UHW9 1150 aa13.62□□□□□ -0.23
RTN3-212ENST00000543123 GTPBP10A4D1E9 387 aaKnown RBP13.61□□□□□ -0.23
RTN3-212ENST00000543123 TMEM8BA6NDV4 472 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 KCNJ18B7U540 433 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 BCAT2O15382 392 aaPredicted RBP13.61□□□□□ -0.23
RTN3-212ENST00000543123 RNASEH1O60930 286 aaKnown RBP13.61□□□□□ -0.23
RTN3-212ENST00000543123 GADD45BO75293 160 aaPredicted RBP13.61□□□□□ -0.23
RTN3-212ENST00000543123 GABBR2O75899 941 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 MOCS3O95396 460 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 CER1O95813 267 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 PROS1P07225 676 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 C7P10643 843 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 HLA-EP13747 358 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 SLC6A4P31645 630 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 SNX16P57768 344 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 GRIK2Q13002 908 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 MTA1Q13330 715 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 ZNF776Q68DI1 518 aaPredicted RBP13.61□□□□□ -0.23
RTN3-212ENST00000543123 TRIM65Q6PJ69 517 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 UNQ6494/PRO21346Q6UXR6 183 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 KDM1BQ8NB78 822 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 FIBINQ8TAL6 211 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 FCRL2Q96LA5 508 aaPredicted RBP13.61□□□□□ -0.23
RTN3-212ENST00000543123 SLC4A5Q9BY07 1137 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 THAP9Q9H5L6 903 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 STIM2Q9P246 746 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 APEX2Q9UBZ4 518 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 SCML1Q9UN30 329 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 PCDHB9Q9Y5E1 797 aa13.61□□□□□ -0.23
RTN3-212ENST00000543123 MUC22E2RYF6 1773 aaPredicted RBP13.6□□□□□ -0.23
RTN3-212ENST00000543123 MOCS2O96007 188 aaPredicted RBP13.6□□□□□ -0.23
RTN3-212ENST00000543123 CALCAP01258 141 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 SLC2A3P11169 496 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
RTN3-212ENST00000543123 MAOBP27338 520 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 CD70P32970 193 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 USP8P40818 1118 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 SGSHP51688 502 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 AFF3P51826 1226 aaKnown RBP13.6□□□□□ -0.23
RTN3-212ENST00000543123 YWHAZP63104 245 aaKnown RBP13.6□□□□□ -0.23
RTN3-212ENST00000543123 PDCLQ13371 301 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 TEAD4Q15561 434 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 PTPRNQ16849 979 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
RTN3-212ENST00000543123 EXOC3L4Q17RC7 722 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 ZNF423Q2M1K9 1284 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 MS4A13Q5J8X5 152 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 TTC39BQ5VTQ0 682 aaPredicted RBP13.6□□□□□ -0.23
RTN3-212ENST00000543123 RNF219Q5W0B1 726 aaPredicted RBP13.6□□□□□ -0.23
RTN3-212ENST00000543123 DENND1BQ6P3S1 775 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 TMEM110Q86TL2 294 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 TAC4Q86UU9 113 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 FAM124AQ86V42 546 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 CARNMT1Q8N4J0 409 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 MLKLQ8NB16 471 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 ZNF606Q8WXB4 792 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 SNX19Q92543 992 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 TTC17Q96AE7 1141 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 SLC39A13Q96H72 371 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 BTN2A3PQ96KV6 586 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 PRICKLE1Q96MT3 831 aaPredicted RBP13.6□□□□□ -0.23
RTN3-212ENST00000543123 BTBD1Q9H0C5 482 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 NAALADL1Q9UQQ1 740 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 NCKAP1Q9Y2A7 1128 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 NEUROG3Q9Y4Z2 214 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 CEP83Q9Y592 693 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 ZFHX4Q86UP3 3567 aa13.6□□□□□ -0.23
RTN3-212ENST00000543123 ADAMTS9Q9P2N4 1935 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 GOLGA6L7A0A1B0GV03 622 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 SPAARA0A1B0GVQ0 90 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 E5RJQ4 531 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 SEMA4FO95754 770 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 FYNP06241 537 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 GLI1P08151 1106 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 ZNF883P0CG24 379 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 CD59P13987 128 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 CSKP41240 450 aa13.59□□□□□ -0.23
RTN3-212ENST00000543123 MATKP42679 507 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms