RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 KLHL20Q9Y2M5 609 aa13.4□□□□□ -0.26
TNC-212ENST00000542877 CEP170BQ9Y4F5 1589 aaPredicted RBP13.4□□□□□ -0.26
TNC-212ENST00000542877 PROCP04070 461 aa13.4□□□□□ -0.26
TNC-212ENST00000542877 MBL2P11226 248 aaPredicted RBP13.4□□□□□ -0.26
TNC-212ENST00000542877 IL1R1P14778 569 aa13.4□□□□□ -0.26
TNC-212ENST00000542877 ETS1P14921 441 aa13.4□□□□□ -0.26
TNC-212ENST00000542877 OTUD3Q5T2D3 398 aaPredicted RBP13.4□□□□□ -0.26
TNC-212ENST00000542877 NT5DC4Q86YG4 428 aa13.4□□□□□ -0.26
TNC-212ENST00000542877 MAP4K3Q8IVH8 894 aa13.4□□□□□ -0.26
TNC-212ENST00000542877 CYP4Z2PQ8N1L4 340 aa13.4□□□□□ -0.26
TNC-212ENST00000542877 ZNF398Q8TD17 642 aa13.4□□□□□ -0.26
TNC-212ENST00000542877 KCNQ5Q9NR82 932 aa13.4□□□□□ -0.26
TNC-212ENST00000542877 FAM220BPB1ANY3 271 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 UNC5CO95185 931 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 TFRCP02786 760 aaKnown RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 MSH3P20585 1137 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 CENPAP49450 140 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 ZNF135P52742 658 aaPredicted RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 SDE2Q6IQ49 451 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 ROGDIQ9GZN7 287 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 COPS7BQ9H9Q2 264 aaPredicted RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 TRPM5Q9NZQ8 1165 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 RAD51BO15315 384 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 TSHRP16473 764 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 TPH1P17752 444 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 AMPD1P23109 780 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 MIPP30301 263 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 RPA3P35244 121 aaPredicted RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 FRG1Q14331 258 aaKnown RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 ARHGAP22Q7Z5H3 698 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 CARNMT1Q8N4J0 409 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 FNDC5Q8NAU1 212 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 PIF1Q9H611 641 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 TAS2R13Q9NYV9 303 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 DDTLA6NHG4 134 aaPredicted RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 CHADO15335 359 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 ABHD2P08910 425 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 SLC6A3Q01959 620 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 AUHQ13825 339 aaKnown RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 TRIM25Q14258 630 aaKnown RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 DGUOKQ16854 277 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 RSBN1Q5VWQ0 802 aaPredicted RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 TMC7Q7Z402 723 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 NET1Q7Z628 596 aaPredicted RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 VPS28Q9UK41 221 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 ERCC6L2Q5T890 1561 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 A0A087X1B8 175 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 PDE2AO00408 941 aaPredicted RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 RPL14P50914 215 aaKnown RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 DRG2P55039 364 aaKnown RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 SOX10P56693 466 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 INAQ16352 499 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 CBWD6Q4V339 395 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 CBWD3Q5JTY5 395 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 CBWD5Q5RIA9 395 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 BNIPLQ7Z465 357 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 CDK5RAP1Q96SZ6 601 aaKnown RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 SYT15Q9BQS2 421 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 DDX18Q9NVP1 670 aaKnown RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 LNPEPQ9UIQ6 1025 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 DUSP12Q9UNI6 340 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
TNC-212ENST00000542877 AP3M1Q9Y2T2 418 aa13.39□□□□□ -0.27
TNC-212ENST00000542877 PNMA8CA0A1B0GUJ8 204 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 ALDH1A2O94788 518 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 GSTM1P09488 218 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 SHMT1P34896 483 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 ZNF157P51786 506 aaPredicted RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 PREPLQ4J6C6 727 aaPredicted RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 CTXN3Q4LDR2 81 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 ZNF470Q6ECI4 717 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 KCNT2Q6UVM3 1135 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 EXOC3L1Q86VI1 746 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 MRPS31Q92665 395 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 GLT1D1Q96MS3 346 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 RNF145Q96MT1 663 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 MTMR9Q96QG7 549 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 TK2O00142 265 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 CCNT2O60583 730 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 HMGCRP04035 888 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 PAX7P23759 505 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 C21orf59P57076 290 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 CHMP1BQ7LBR1 199 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 RNF180Q86T96 592 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 STK32CQ86UX6 486 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 FAM228AQ86W67 206 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 HERC6Q8IVU3 1022 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 FBXO16Q8IX29 292 aaPredicted RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 ACTRT2Q8TDY3 377 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 UTP15Q8TED0 518 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 CELF6Q96J87 481 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 TBL1YQ9BQ87 522 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 WDR41Q9HAD4 459 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 A1CFQ9NQ94 594 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 TMEM51Q9NW97 253 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms