RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 SETSIPP0DME0 302 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 VDRP11473 427 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 CDK4P11802 303 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 MCCD1P59942 119 aaPredicted RBP12.99□□□□□ -0.33
COPS7A-211ENST00000540408 KRT85P78386 507 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 DPYDQ12882 1025 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 SMAD1Q15797 465 aaKnown RBP12.99□□□□□ -0.33
COPS7A-211ENST00000540408 PTPRNQ16849 979 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 NUGGCQ68CJ6 796 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 KIAA0895LQ68EN5 471 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 TMPRSS12Q86WS5 348 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 MFN1Q8IWA4 741 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 SCUBE3Q8IX30 993 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 KCTD13Q8WZ19 329 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 OMDQ99983 421 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 FBXL12Q9NXK8 326 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 PLXNB3Q9ULL4 1909 aa12.99□□□□□ -0.33
COPS7A-211ENST00000540408 CKAP5Q14008 2032 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 DSPP15924 2871 aaKnown RBP12.98□□□□□ -0.33
COPS7A-211ENST00000540408 FAM149AA5PLN7 773 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 LRRC72A6NJI9 287 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 H0Y8X5 98 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 TULP2O00295 520 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 ASLP04424 464 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 LCP1P13796 627 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 JUPP14923 745 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 ABCB4P21439 1286 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 HNF1BP35680 557 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 CTSKP43235 329 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 CUL2Q13617 745 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 DCAF17Q5H9S7 520 aaPredicted RBP12.98□□□□□ -0.33
COPS7A-211ENST00000540408 PIK3R6Q5UE93 754 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 SCML4Q8N228 414 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 UBA3Q8TBC4 463 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 AZIN2Q96A70 460 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 TSG101Q99816 390 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 RSPH9Q9H1X1 276 aaPredicted RBP12.98□□□□□ -0.33
COPS7A-211ENST00000540408 PABPC3Q9H361 631 aaKnown RBP12.98□□□□□ -0.33
COPS7A-211ENST00000540408 STIM2Q9P246 746 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 SLCO1B1Q9Y6L6 691 aa12.98□□□□□ -0.33
COPS7A-211ENST00000540408 A0A087WV48 116 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 A0A1B0GTQ1 180 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 A0A1W2PPC4 97 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 VILLO15195 856 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 YKT6O15498 198 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 PAPSS1O43252 624 aaPredicted RBP12.97□□□□□ -0.33
COPS7A-211ENST00000540408 MSI1O43347 362 aaKnown RBP12.97□□□□□ -0.33
COPS7A-211ENST00000540408 ACSL4O60488 711 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 MOCS3O95396 460 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 ITGAVP06756 1048 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 C1SP09871 688 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 TBXAS1P24557 533 aaPredicted RBP12.97□□□□□ -0.33
COPS7A-211ENST00000540408 CD70P32970 193 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 NDUFA8P51970 172 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 TBX4P57082 545 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 DAOAP59103 153 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 IL9RQ01113 521 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 CAMK2BQ13554 666 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 SLC45A4Q5BKX6 768 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 C6orf118Q5T5N4 469 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 RFWD3Q6PCD5 774 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 DHRS13Q6UX07 377 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 KRBA2Q6ZNG9 492 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 BHLHA9Q7RTU4 235 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 HJURPQ8NCD3 748 aaPredicted RBP12.97□□□□□ -0.33
COPS7A-211ENST00000540408 FIBINQ8TAL6 211 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 IRGQQ8WZA9 623 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 EEF2KMTQ96G04 330 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 ELF4Q99607 663 aaPredicted RBP12.97□□□□□ -0.33
COPS7A-211ENST00000540408 AASDHPPTQ9NRN7 309 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 TPX2Q9ULW0 747 aaKnown RBP12.97□□□□□ -0.33
COPS7A-211ENST00000540408 PCDHGA1Q9Y5H4 931 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 PTPRBP23467 1997 aa12.97□□□□□ -0.33
COPS7A-211ENST00000540408 ANKRD11Q6UB99 2663 aaPredicted RBP12.96□□□□□ -0.33
COPS7A-211ENST00000540408 FREM2Q5SZK8 3169 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 TARSL2A2RTX5 802 aaKnown RBP12.96□□□□□ -0.33
COPS7A-211ENST00000540408 ENC1O14682 589 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 RNASEH2AO75792 299 aaKnown RBP12.96□□□□□ -0.33
COPS7A-211ENST00000540408 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.33
COPS7A-211ENST00000540408 CD38P28907 300 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 ABCG1P45844 678 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 SGSHP51688 502 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 GALCP54803 685 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 CDH18Q13634 790 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 PKP1Q13835 747 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 STILQ15468 1287 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 CST6Q15828 149 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 HNRNPA1L2Q32P51 320 aaKnown RBP12.96□□□□□ -0.33
COPS7A-211ENST00000540408 RNF219Q5W0B1 726 aaPredicted RBP12.96□□□□□ -0.33
COPS7A-211ENST00000540408 MSANTD2Q6P1R3 559 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 LRRC69Q6ZNQ3 347 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 MARCH9Q86YJ5 346 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 DHX40Q8IX18 779 aaKnown RBP12.96□□□□□ -0.33
COPS7A-211ENST00000540408 CARNMT1Q8N4J0 409 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 KDM1BQ8NB78 822 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 OR2T34Q8NGX1 318 aa12.96□□□□□ -0.33
COPS7A-211ENST00000540408 TTC17Q96AE7 1141 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms