RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 FSCN3Q9NQT6 498 aa8.99□□□□□ -0.97
DDB1-212ENST00000538470 CNTN6Q9UQ52 1028 aa8.99□□□□□ -0.97
DDB1-212ENST00000538470 CTNND2Q9UQB3 1225 aa8.99□□□□□ -0.97
DDB1-212ENST00000538470 TLR6Q9Y2C9 796 aa8.99□□□□□ -0.97
DDB1-212ENST00000538470 MSRB2Q9Y3D2 182 aa8.99□□□□□ -0.97
DDB1-212ENST00000538470 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.99□□□□□ -0.97
DDB1-212ENST00000538470 PLXNA2O75051 1894 aa8.99□□□□□ -0.97
DDB1-212ENST00000538470 ANKRD11Q6UB99 2663 aaPredicted RBP8.99□□□□□ -0.97
DDB1-212ENST00000538470 AKAP13Q12802 2813 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 SPAARA0A1B0GVQ0 90 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 PPP1R3GB7ZBB8 358 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 RNF225M0QZC1 329 aaPredicted RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 BCAT2O15382 392 aaPredicted RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 MED7O43513 233 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 TBL1XO60907 577 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 APOEP02649 317 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 DNTTP04053 509 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 HLA-EP13747 358 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 POLR2EP19388 210 aaKnown RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 MATKP42679 507 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 SFSWAPQ12872 951 aaKnown RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 PTPRNQ16849 979 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 MBLAC2Q68D91 279 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 ZNF776Q68DI1 518 aaPredicted RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 CACUL1Q86Y37 369 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 NAXDQ8IW45 347 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 MFN1Q8IWA4 741 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 CCDC117Q8IWD4 279 aaPredicted RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 EHBP1Q8NDI1 1231 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 FIBINQ8TAL6 211 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 DQX1Q8TE96 717 aaKnown RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 CYB5D2Q8WUJ1 264 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 FCRL2Q96LA5 508 aaPredicted RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 PRICKLE1Q96MT3 831 aaPredicted RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 KREMEN1Q96MU8 473 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 ZSWIM1Q9BR11 485 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 MIR1-1HGQ9H1L0 117 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 SGK2Q9HBY8 427 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 SUN2Q9UH99 717 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 SCML1Q9UN30 329 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.98□□□□□ -0.97
DDB1-212ENST00000538470 PCDHGB2Q9Y5G2 931 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 PTPRBP23467 1997 aa8.98□□□□□ -0.97
DDB1-212ENST00000538470 ASPMQ8IZT6 3477 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 COL5A1P20908 1838 aaPredicted RBP8.97□□□□□ -0.97
DDB1-212ENST00000538470 FAM221BA6H8Z2 402 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 HYAL3O43820 417 aaPredicted RBP8.97□□□□□ -0.97
DDB1-212ENST00000538470 GABBR2O75899 941 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 SEMA4FO95754 770 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 BMP6P22004 513 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 SLC6A4P31645 630 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 CD70P32970 193 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 GPD2P43304 727 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 GRIA4P48058 902 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 SGSHP51688 502 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 AFF3P51826 1226 aaKnown RBP8.97□□□□□ -0.97
DDB1-212ENST00000538470 ST8SIA6P61647 398 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 RPS14P62263 151 aaKnown RBP8.97□□□□□ -0.97
DDB1-212ENST00000538470 MTA1Q13330 715 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 CDH18Q13634 790 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 ARID5BQ14865 1188 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 TEAD4Q15561 434 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 TTC39BQ5VTQ0 682 aaPredicted RBP8.97□□□□□ -0.97
DDB1-212ENST00000538470 ISM2Q6H9L7 571 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 RFWD3Q6PCD5 774 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 USP30Q70CQ3 517 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 RRAGAQ7L523 313 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 RAB44Q7Z6P3 723 aaPredicted RBP8.97□□□□□ -0.97
DDB1-212ENST00000538470 GLRX5Q86SX6 157 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 TAC4Q86UU9 113 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 OR2I1PQ8NGU4 316 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 WFDC5Q8TCV5 224 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 CLEC4CQ8WTT0 213 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 ZCCHC14Q8WYQ9 949 aaKnown RBP8.97□□□□□ -0.97
DDB1-212ENST00000538470 TTC17Q96AE7 1141 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 FAM149B1Q96BN6 582 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 SLC39A13Q96H72 371 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 LMLNQ96KR4 655 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 SLC4A5Q9BY07 1137 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 MIS12Q9H081 205 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 BTBD1Q9H0C5 482 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 RSPH9Q9H1X1 276 aaPredicted RBP8.97□□□□□ -0.97
DDB1-212ENST00000538470 POPDC2Q9HBU9 364 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 PRSS16Q9NQE7 514 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 ZMIZ1Q9ULJ6 1067 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 TPX2Q9ULW0 747 aaKnown RBP8.97□□□□□ -0.97
DDB1-212ENST00000538470 PCDHB9Q9Y5E1 797 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 ZFHX4Q86UP3 3567 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 ITIH6Q6UXX5 1313 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 CFAP47Q6ZTR5 3102 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 ACACAQ13085 2346 aa8.97□□□□□ -0.97
DDB1-212ENST00000538470 ZFYVE26Q68DK2 2539 aa8.96□□□□□ -0.97
DDB1-212ENST00000538470 PIK3R2O00459 728 aa8.96□□□□□ -0.98
DDB1-212ENST00000538470 CAPN9O14815 690 aa8.96□□□□□ -0.98
DDB1-212ENST00000538470 FLRT2O43155 660 aa8.96□□□□□ -0.98
DDB1-212ENST00000538470 SH3BP5O60239 455 aa8.96□□□□□ -0.98
DDB1-212ENST00000538470 RNASEH1O60930 286 aaKnown RBP8.96□□□□□ -0.98
DDB1-212ENST00000538470 LUC7L3O95232 432 aaKnown RBP8.96□□□□□ -0.98
DDB1-212ENST00000538470 MOCS3O95396 460 aa8.96□□□□□ -0.98
DDB1-212ENST00000538470 TOP3BO95985 862 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms