RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 USP3Q9Y6I4 520 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 ITGA2BP08514 1039 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 SLC6A3Q01959 620 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 LIN52Q52LA3 116 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 BOLA3Q53S33 107 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 ZNF618Q5T7W0 954 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 LBX2Q6XYB7 198 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 TRPM4Q8TD43 1214 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 ZFAND2BQ8WV99 257 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 HOXC10Q9NYD6 342 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 AK5Q9Y6K8 562 aa14.49□□□□□ -0.09
CLPB-209ENST00000538039 A0A0G2JMZ2 1700 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 LRRC37A2A6NM11 1700 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 GOLGA8QA0A0J9YX86 632 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 GOLGA8OA6NCC3 632 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 GOLGA8NF8WBI6 632 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 LTFP02788 710 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 ARSAP15289 507 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 RAG1P15918 1043 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 VCLP18206 1134 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 CDK7P50613 346 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 ATXN3P54252 364 aaPredicted RBP14.48□□□□□ -0.09
CLPB-209ENST00000538039 SEMA5AQ13591 1074 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 GSTA3Q16772 222 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 STEAP4Q687X5 459 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 PDPK2PQ6A1A2 396 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 FAM43BQ6ZT52 329 aaPredicted RBP14.48□□□□□ -0.09
CLPB-209ENST00000538039 ARCQ7LC44 396 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 WDR75Q8IWA0 830 aaKnown RBP14.48□□□□□ -0.09
CLPB-209ENST00000538039 RNF217Q8TC41 542 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 UBAP1Q9NZ09 502 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 G3BP2Q9UN86 482 aaKnown RBP14.48□□□□□ -0.09
CLPB-209ENST00000538039 SF3B1O75533 1304 aaKnown RBP eCLIP14.48□□□□□ -0.095e-6■■■■■ 115
CLPB-209ENST00000538039 CAPN8A6NHC0 703 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 MFSD11O43934 449 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 PGM3O95394 542 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 CCDC130P13994 396 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 SDC4P31431 198 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 COPAP53621 1224 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 LGSNQ5TDP6 509 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 TRIM42Q8IWZ5 723 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 SLC4A5Q9BY07 1137 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 COG4Q9H9E3 785 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 AS3MTQ9HBK9 375 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 TXNRD2Q9NNW7 524 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 PDP2Q9P2J9 529 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 COPG2Q9UBF2 871 aa14.48□□□□□ -0.09
CLPB-209ENST00000538039 A0A1B0GTW7 788 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 IGFBP6P24592 240 aaPredicted RBP14.47□□□□□ -0.09
CLPB-209ENST00000538039 TMEM110Q86TL2 294 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 FAM131BQ86XD5 332 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 MAP7D3Q8IWC1 876 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 COLGALT1Q8NBJ5 622 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 ACTRT2Q8TDY3 377 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 SPATA33Q96N06 139 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 QKIQ96PU8 341 aaKnown RBP eCLIP14.47□□□□□ -0.09
CLPB-209ENST00000538039 GCNAQ96QF7 691 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 ZNF670Q9BS34 389 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 WDR55Q9H6Y2 383 aaPredicted RBP14.47□□□□□ -0.09
CLPB-209ENST00000538039 DPP3Q9NY33 737 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 ETAA1Q9NY74 926 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 AP4E1Q9UPM8 1137 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 APOBEC2Q9Y235 224 aaKnown RBP14.47□□□□□ -0.09
CLPB-209ENST00000538039 NUP205Q92621 2012 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 WDR90Q96KV7 1748 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 GOLGA8TH3BQL2 631 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 DPYSL4O14531 572 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 DGKIO75912 1065 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 JUNP05412 331 aaKnown RBP14.47□□□□□ -0.09
CLPB-209ENST00000538039 CHRNGP07510 517 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 LCP1P13796 627 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 TPSB2P20231 275 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 LMO2P25791 158 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 PSMB4P28070 264 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 CUL3Q13618 768 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 TLR1Q15399 786 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 TPSAB1Q15661 275 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 DPYSL2Q16555 572 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 CELF3Q5SZQ8 465 aaKnown RBP14.47□□□□□ -0.09
CLPB-209ENST00000538039 RASIP1Q5U651 963 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 ARMC3Q5W041 872 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 PPP2R3CQ969Q6 453 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 C18orf25Q96B23 403 aaPredicted RBP14.47□□□□□ -0.09
CLPB-209ENST00000538039 EPAS1Q99814 870 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 MDM4O15151 490 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 C22orf31O95567 290 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 MARK2Q7KZI7 788 aaKnown RBP14.47□□□□□ -0.09
CLPB-209ENST00000538039 RNF148Q8N7C7 305 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 LRRC39Q96DD0 335 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 LENG8Q96PV6 779 aaPredicted RBP14.47□□□□□ -0.09
CLPB-209ENST00000538039 TBCBQ99426 244 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 NT5C1AQ9BXI3 368 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 VRTNQ9H8Y1 702 aa14.47□□□□□ -0.09
CLPB-209ENST00000538039 CITO14578 2027 aa14.46□□□□□ -0.09
CLPB-209ENST00000538039 C19orf81C9J6K1 198 aa14.46□□□□□ -0.09
CLPB-209ENST00000538039 G3V2L1 256 aa14.46□□□□□ -0.09
CLPB-209ENST00000538039 STX16-NPEPL1H3BU86 382 aa14.46□□□□□ -0.09
CLPB-209ENST00000538039 IL18RAPO95256 599 aa14.46□□□□□ -0.09
CLPB-209ENST00000538039 PDGFRBP09619 1106 aa14.46□□□□□ -0.09
CLPB-209ENST00000538039 DPP6P42658 865 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms