RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 COL20A1Q9P218 1284 aa12.56□□□□□ -0.4
CIT-208ENST00000537607 NCANO14594 1321 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 PIAS1O75925 651 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 CALB2P22676 271 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 PSMB4P28070 264 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 RPL22P35268 128 aaKnown RBP12.55□□□□□ -0.4
CIT-208ENST00000537607 PLK1P53350 603 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 CYLC2Q14093 348 aaPredicted RBP12.55□□□□□ -0.4
CIT-208ENST00000537607 PATL1Q86TB9 770 aaKnown RBP12.55□□□□□ -0.4
CIT-208ENST00000537607 LRRN4Q8WUT4 740 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 RNF157Q96PX1 679 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 VAT1Q99536 393 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 NXF3Q9H4D5 531 aaKnown RBP12.55□□□□□ -0.4
CIT-208ENST00000537607 SLIT3O75094 1523 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 CASZ1Q86V15 1759 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 FAM95CA0A1B0GW59 222 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 LIASO43766 372 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 TOMM70O94826 608 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 DDHD2O94830 711 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 TAS2R40P59535 323 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 BSNDQ8WZ55 320 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 HES6Q96HZ4 224 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 SENP6Q9GZR1 1112 aaPredicted RBP12.55□□□□□ -0.4
CIT-208ENST00000537607 CD248Q9HCU0 757 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 TCF7L2Q9NQB0 619 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 SUFUQ9UMX1 484 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 SLCO1B7G3V0H7 640 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 SERPINE1P05121 402 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 CKBP12277 381 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 VHLP40337 213 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 PLD1Q13393 1074 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 LRRC23Q53EV4 343 aaPredicted RBP12.55□□□□□ -0.4
CIT-208ENST00000537607 AGKQ53H12 422 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 GRTP1Q5TC63 336 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 TMEM154Q6P9G4 183 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 BNC2Q6ZN30 1099 aaPredicted RBP12.55□□□□□ -0.4
CIT-208ENST00000537607 C12orf56Q8IXR9 622 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 GPR20Q99678 358 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 PRDM12Q9H4Q4 367 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 ZNF556Q9HAH1 456 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 PCYOX1Q9UHG3 505 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 MED1Q15648 1581 aaPredicted RBP12.55□□□□□ -0.4
CIT-208ENST00000537607 GUCA1CO95843 209 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 SHBGP04278 402 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 ERVK-10P10266 1014 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 PDPK2PQ6A1A2 396 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 RGMBQ6NW40 437 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 C16orf59Q7L2K0 433 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 OR52K1Q8NGK4 314 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 APBB2Q92870 758 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 VPS50Q96JG6 964 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 PWWP2AQ96N64 755 aa12.55□□□□□ -0.4
CIT-208ENST00000537607 SIGLEC1Q9BZZ2 1709 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 A0A0A0MRY4 1105 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 NR5A2O00482 541 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 PHGDHO43175 533 aaKnown RBP12.54□□□□□ -0.4
CIT-208ENST00000537607 RAP1GDS1P52306 607 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 NR6A1Q15406 480 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 PARP6Q2NL67 630 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 SPANXN3Q5MJ09 141 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 OTOAQ7RTW8 1153 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 SPATA13Q96N96 652 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 RXFP1Q9HBX9 757 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 PTPRHQ9HD43 1115 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 ZNF446Q9NWS9 450 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 TAGLN3Q9UI15 199 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 CLDN5O00501 218 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 BAIAP3O94812 1187 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 MMP13P45452 471 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 SLC1A6P48664 564 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 PRIM2P49643 509 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 SP3Q02447 781 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 C16orf46Q6P387 395 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 PALB2Q86YC2 1186 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 SLC44A2Q8IWA5 706 aaPredicted RBP12.54□□□□□ -0.4
CIT-208ENST00000537607 ACOX2Q99424 681 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 ZNF541Q9H0D2 1346 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 BTNL10A8MVZ5 291 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 MAP2K7O14733 419 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 TBC1D4O60343 1298 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 HALP42357 657 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 CCL23P55773 120 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 NFYCQ13952 458 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 DUSP28Q4G0W2 176 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 GRAMD4Q6IC98 578 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 BBS12Q6ZW61 710 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 HELQQ8TDG4 1101 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 PCDHB18PQ96TA0 734 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 TBL1YQ9BQ87 522 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 NRDE2Q9H7Z3 1164 aa12.54□□□□□ -0.4
CIT-208ENST00000537607 UBA2Q9UBT2 640 aaPredicted RBP12.54□□□□□ -0.4
CIT-208ENST00000537607 C16orf96A6NNT2 1141 aa12.53□□□□□ -0.4
CIT-208ENST00000537607 RBAK-RBAKDNI3L0D1 243 aa12.53□□□□□ -0.4
CIT-208ENST00000537607 FCHO1O14526 889 aa12.53□□□□□ -0.4
CIT-208ENST00000537607 UBDO15205 165 aa12.53□□□□□ -0.4
CIT-208ENST00000537607 MPOP05164 745 aa12.53□□□□□ -0.4
CIT-208ENST00000537607 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
CIT-208ENST00000537607 ALOX15P16050 662 aaPredicted RBP12.53□□□□□ -0.4
CIT-208ENST00000537607 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
CIT-208ENST00000537607 HORMAD1Q86X24 394 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms