RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 TJP2Q9UDY2 1190 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 SFMBT1Q9UHJ3 866 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 NUDT5Q9UKK9 219 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 ATG2BQ96BY7 2078 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 F5H5T6 163 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 TRUB2O95900 331 aaKnown RBP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 ABCB4P21439 1286 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 NNMTP40261 264 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 IL12RB1P42701 662 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 RGS7P49802 495 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 NRG1Q02297 640 aaPredicted RBP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 MESP2Q0VG99 397 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 SF3A2Q15428 464 aaKnown RBP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 SERPINA13PQ6UXR4 307 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 SND1Q7KZF4 910 aaKnown RBP eCLIP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 ADIPOR2Q86V24 386 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 MFN1Q8IWA4 741 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 EDEM1Q92611 657 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 PIGKQ92643 395 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 NAA15Q9BXJ9 866 aaKnown RBP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 RSPH9Q9H1X1 276 aaPredicted RBP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 MYO6Q9UM54 1294 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 MYO18AQ92614 2054 aaKnown RBP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 EDDM13A0A1B0GTR0 161 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 A0A1B0GVM2 712 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 TCAF2A6NFQ2 919 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 KCNJ18B7U540 433 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
CSDE1-217ENST00000534699 YKT6O15498 198 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 TBL1XO60907 577 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 KCNK5O95279 499 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 CCDC172P0C7W6 258 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 SLC9A1P19634 815 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 TACR2P21452 398 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 COPAP53621 1224 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 KCNJ12Q14500 433 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 TEAD4Q15561 434 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 TCP11X2Q5H9J9 407 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 MIIPQ5JXC2 388 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 FKBP15Q5T1M5 1219 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 KLHDC7AQ5VTJ3 777 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 PIP4P1Q86T03 277 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 FAM174AQ8TBP5 190 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 NT5C3BQ969T7 300 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 SKA1Q96BD8 255 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 FAM149B1Q96BN6 582 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 PRMT1Q99873 361 aaKnown RBP10.76□□□□□ -0.69
CSDE1-217ENST00000534699 RXFP3Q9NSD7 469 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 LMBRD1Q9NUN5 540 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 C10orf142B7Z368 130 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 ARHGAP33O14559 1287 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 ADH1BP00325 375 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 HLA-FP30511 346 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 MATKP42679 507 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 CCR5P51681 352 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 FNDC3BQ53EP0 1204 aaKnown RBP10.76□□□□□ -0.69
CSDE1-217ENST00000534699 TRIM61Q5EBN2 209 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 CDKAL1Q5VV42 579 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 DPY19L2P1Q6NXN4 242 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 DSG4Q86SJ6 1040 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 TAC4Q86UU9 113 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 TMPRSS6Q8IU80 811 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 HDDC3Q8N4P3 179 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 FAM131CQ96AQ9 280 aa10.76□□□□□ -0.69
CSDE1-217ENST00000534699 MED19A0JLT2 244 aaPredicted RBP10.75□□□□□ -0.69
CSDE1-217ENST00000534699 LNP1A1A4G5 178 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 E5RJQ4 531 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 OPHN1O60890 802 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CLDN11O75508 207 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CER1O95813 267 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CLCN6P51797 869 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 SEMA3BQ13214 749 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 HNRNPA1L2Q32P51 320 aaKnown RBP10.75□□□□□ -0.69
CSDE1-217ENST00000534699 OLFML1Q6UWY5 402 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 SFTPA1Q8IWL2 248 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 SCUBE3Q8IX30 993 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 ST7Q9NRC1 585 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 ARHGEF38Q9NXL2 777 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 LRRC10BA6NIK2 292 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CDX4O14627 284 aaPredicted RBP10.75□□□□□ -0.69
CSDE1-217ENST00000534699 DCLK1O15075 740 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 DNTTP04053 509 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CDK4P11802 303 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 PTMSP20962 102 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CLCN1P35523 988 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CXCR3P49682 368 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CDH4P55283 916 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 SLC20A2Q08357 652 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CDH18Q13634 790 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CAMK4Q16566 473 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 NADSYN1Q6IA69 706 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 KIAA1211LQ6NV74 962 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 KIAA1324Q6UXG2 1013 aaKnown RBP10.75□□□□□ -0.69
CSDE1-217ENST00000534699 GLRX5Q86SX6 157 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 SETD3Q86TU7 594 aaPredicted RBP10.75□□□□□ -0.69
CSDE1-217ENST00000534699 C18orf8Q96DM3 657 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 HAPLN3Q96S86 360 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 ACOX2Q99424 681 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 NPY6RQ99463 290 aa10.75□□□□□ -0.69
CSDE1-217ENST00000534699 CIPCQ9C0C6 399 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms