RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 MID1O15344 667 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 SIGLEC6O43699 453 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 DXOO77932 396 aaKnown RBP12.84□□□□□ -0.35
SVIP-205ENST00000533774 GJB2P29033 226 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 UCNP55089 124 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 GABREP78334 506 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 COG7P83436 770 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
SVIP-205ENST00000533774 MBLAC2Q68D91 279 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 USP30Q70CQ3 517 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 CCDC186Q7Z3E2 898 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.84□□□□□ -0.35
SVIP-205ENST00000533774 EXD3Q8N9H8 876 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 KCNE4Q8WWG9 221 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 DCLK3Q9C098 648 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 FBXL12Q9NXK8 326 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 CCDC39Q9UFE4 941 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 PLA2G4CQ9UP65 541 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 USP3Q9Y6I4 520 aa12.84□□□□□ -0.35
SVIP-205ENST00000533774 SLC12A8A0AV02 714 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 H3BQV1 296 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 TLR4O00206 839 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 YKT6O15498 198 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 SDC3O75056 442 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 PHACTR2O75167 634 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 BMP15O95972 392 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 C4BPAP04003 597 aaKnown RBP12.83□□□□□ -0.36
SVIP-205ENST00000533774 CYBBP04839 570 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 ARRB1P49407 418 aaPredicted RBP12.83□□□□□ -0.36
SVIP-205ENST00000533774 NFKB2Q00653 900 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 NCOA4Q13772 614 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 E2F5Q15329 346 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 SPOPLQ6IQ16 392 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 SLC25A45Q8N413 288 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 ZNF507Q8TCN5 953 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 GANCQ8TET4 914 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 VCPIP1Q96JH7 1222 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 FBRSQ9HAH7 460 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 CLIC5Q9NZA1 410 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 MARCH2Q9P0N8 246 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 GGA2Q9UJY4 613 aa12.83□□□□□ -0.36
SVIP-205ENST00000533774 LRRIQ3A6PVS8 624 aaPredicted RBP12.82□□□□□ -0.36
SVIP-205ENST00000533774 K7ENP7 123 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 TERTO14746 1132 aaKnown RBP12.82□□□□□ -0.36
SVIP-205ENST00000533774 SIN3BO75182 1162 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 USP12O75317 370 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 DLDP09622 509 aaKnown RBP12.82□□□□□ -0.36
SVIP-205ENST00000533774 RALAP11233 206 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 PABPC1P11940 636 aaKnown RBP12.82□□□□□ -0.36
SVIP-205ENST00000533774 MYF5P13349 255 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 CD70P32970 193 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 ASPAP45381 313 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 CCR5P51681 352 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 PPP2CBP62714 309 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 PPP2CAP67775 309 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 PDE4CQ08493 712 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 BIRC3Q13489 604 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 INO80CQ6PI98 192 aaPredicted RBP12.82□□□□□ -0.36
SVIP-205ENST00000533774 NELFCDQ8IXH7 590 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 XXYLT1Q8NBI6 393 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 OR2T34Q8NGX1 318 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 WFIKKN2Q8TEU8 576 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 SKA1Q96BD8 255 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 CYFIP2Q96F07 1278 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 SERAC1Q96JX3 654 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 LMLNQ96KR4 655 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 ERVMER34-1Q9H9K5 563 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 PNPLA8Q9NP80 782 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 NCKAP1Q9Y2A7 1128 aa12.82□□□□□ -0.36
SVIP-205ENST00000533774 PMS2P1A4D2B8 440 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 OPA1O60313 960 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 LSSP48449 732 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 ERVPABLB-1P60509 514 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 SKOR1P84550 965 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 E2F1Q01094 437 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 NFATC3Q12968 1075 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 TRIP4Q15650 581 aaPredicted RBP12.81□□□□□ -0.36
SVIP-205ENST00000533774 CST6Q15828 149 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 MPPE1Q53F39 396 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 UNC93AQ86WB7 457 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 CCDC65Q8IXS2 484 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 AADATQ8N5Z0 425 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 PARD3BQ8TEW8 1205 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 NDRG1Q92597 394 aaKnown RBP12.81□□□□□ -0.36
SVIP-205ENST00000533774 GOLGA1Q92805 767 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 MRGPRX3Q96LB0 322 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 DPH1Q9BZG8 443 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 POLR1BQ9H9Y6 1135 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 UCKL1Q9NWZ5 548 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 SUN2Q9UH99 717 aa12.81□□□□□ -0.36
SVIP-205ENST00000533774 SRPRBQ9Y5M8 271 aaKnown RBP12.81□□□□□ -0.36
SVIP-205ENST00000533774 NBASA2RRP1 2371 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 SCN8AQ9UQD0 1980 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 RELNP78509 3460 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 LY6G6EA0A0G2JKS1 128 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 A0A1B0GVM2 712 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 LRRC72A6NJI9 287 aa12.8□□□□□ -0.36
SVIP-205ENST00000533774 EIF3DO15371 548 aaKnown RBP eCLIP12.8□□□□□ -0.36
SVIP-205ENST00000533774 CSO75390 466 aaKnown RBP12.8□□□□□ -0.36
SVIP-205ENST00000533774 RNASEH2AO75792 299 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms