RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SEMA4DQ92854 862 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 ISL2Q96A47 359 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 CCDC34Q96HJ3 373 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 ZC3H10Q96K80 434 aaKnown RBP7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 MED15Q96RN5 788 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 SDCBP2Q9H190 292 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 DPEP3Q9H4B8 488 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 CRTAC1Q9NQ79 661 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 HPS4Q9NQG7 708 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 RMND1Q9NWS8 449 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 PCOLCE2Q9UKZ9 415 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 CCL26Q9Y258 94 aa7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 R3HCC1Q9Y3T6 440 aaKnown RBP7.43□□□□□ -1.22
TRIM53CP-201ENST00000531490 ATG2BQ96BY7 2078 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 COL4A2P08572 1712 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 SPAARA0A1B0GVQ0 90 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 BCLAF3A2AJT9 711 aaKnown RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 CDX4O14627 284 aaPredicted RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 CETN3O15182 167 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 MAPK13O15264 365 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 HLA-DRAP01903 254 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 HAPLN1P10915 354 aaPredicted RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 ARSAP15289 507 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 WARSP23381 471 aaKnown RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 GABRR2P28476 465 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 ALDH1A3P47895 512 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 LHX1P48742 406 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 IRX4P78413 519 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 TAGLNQ01995 201 aaKnown RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 ITPRIPL2Q3MIP1 535 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 ARHGAP29Q52LW3 1261 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 TMEM196Q5HYL7 178 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 DAB2IPQ5VWQ8 1189 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 TTI2Q6NXR4 508 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 C12orf40Q86WS4 652 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 ZC3H3Q8IXZ2 948 aaKnown RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 DCP1BQ8IZD4 617 aaKnown RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 SYNPOQ8N3V7 929 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 LEMD2Q8NC56 503 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 OR6B3Q8NGW1 331 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 TAS1R2Q8TE23 839 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 E2F7Q96AV8 911 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 MSANTD3Q96H12 275 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 SEPT5Q99719 369 aaPredicted RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 EBF3Q9H4W6 596 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 SMYD3Q9H7B4 428 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 APOBEC3GQ9HC16 384 aaKnown RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 GKN1Q9NS71 199 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 TMEM30AQ9NV96 361 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 HOOK1Q9UJC3 728 aaKnown RBP7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 MAFFQ9ULX9 164 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 PCDHB5Q9Y5E4 795 aa7.42□□□□□ -1.22
TRIM53CP-201ENST00000531490 MYOFQ9NZM1 2061 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 ASXL3Q9C0F0 2248 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 CCDC163A0A0D9SF12 145 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 CLDN5O00501 218 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 OBSL1O75147 1896 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 TACC1O75410 805 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 ASS1P00966 412 aaKnown RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 HMGA1P17096 107 aaKnown RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 PTPN1P18031 435 aaKnown RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 BCKDHBP21953 392 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 BDNFP23560 247 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 ATICP31939 592 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 GBP1P32455 592 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 NTF4P34130 210 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 TUFMP49411 452 aaKnown RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 GALK1P51570 392 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 AP3M2P53677 418 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 CACNA2D1P54289 1103 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 EPHB3P54753 998 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 FKBP3Q00688 224 aaKnown RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 MYL7Q01449 175 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 TSPY1Q01534 308 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 GRSF1Q12849 480 aaKnown RBP eCLIP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 ELF2Q15723 593 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 SGSM1Q2NKQ1 1148 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 ZNF699Q32M78 642 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 CBWD6Q4V339 395 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 SOWAHCQ53LP3 525 aaPredicted RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 ZNF667Q5HYK9 610 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 CBWD3Q5JTY5 395 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 CBWD5Q5RIA9 395 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 MEI1Q5TIA1 1274 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 C1orf228Q6PIY5 440 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 SCARA5Q6ZMJ2 495 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 PAQR9Q6ZVX9 377 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 INTS8Q75QN2 995 aaKnown RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 TMEM150AQ86TG1 271 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 RPLP0P6Q8NHW5 317 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 SPPL2BQ8TCT7 592 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 GPT2Q8TD30 523 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 BPIFB1Q8TDL5 484 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 NELFBQ8WX92 580 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 PSMG2Q969U7 264 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 SYAP1Q96A49 352 aaPredicted RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 PCED1BQ96HM7 432 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 DHTKD1Q96HY7 919 aaPredicted RBP7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 GBP4Q96PP9 640 aa7.41□□□□□ -1.22
TRIM53CP-201ENST00000531490 SYT15Q9BQS2 421 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms