RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 PTPRNQ16849 979 aa23.12■■□□□ 1.29
TRAPPC4-210ENST00000531290 GBP6Q6ZN66 633 aa23.12■■□□□ 1.29
TRAPPC4-210ENST00000531290 FIBINQ8TAL6 211 aa23.12■■□□□ 1.29
TRAPPC4-210ENST00000531290 ADAM32Q8TC27 787 aa23.12■■□□□ 1.29
TRAPPC4-210ENST00000531290 DNAAF2Q9NVR5 837 aaKnown RBP23.12■■□□□ 1.29
TRAPPC4-210ENST00000531290 KRT37O76014 449 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 MOCS2O96007 188 aaPredicted RBP23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 APOEP02649 317 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 ST8SIA6P61647 398 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 YWHAZP63104 245 aaKnown RBP23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 SIM1P81133 766 aaPredicted RBP23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 ZBTB16Q05516 673 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 SLC14A1Q13336 389 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 ARHGAP44Q17R89 818 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 SYPL2Q5VXT5 272 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 NADSYN1Q6IA69 706 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 TRIM65Q6PJ69 517 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 TMEM110Q86TL2 294 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 CARNMT1Q8N4J0 409 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 ZCCHC9Q8N567 271 aaKnown RBP23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 WFDC5Q8TCV5 224 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 SLC39A13Q96H72 371 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 PCED1AQ9H1Q7 454 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 THAP9Q9H5L6 903 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 POPDC2Q9HBU9 364 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 PRSS16Q9NQE7 514 aa23.11■■□□□ 1.29
TRAPPC4-210ENST00000531290 NUP205Q92621 2012 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 SPAARA0A1B0GVQ0 90 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 E5RJQ4 531 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 PAPSS1O43252 624 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 DNTTP04053 509 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 SLC9A1P19634 815 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 RDXP35241 583 aaKnown RBP23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 RPS24P62847 133 aaKnown RBP23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 CDH18Q13634 790 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 TPD52L1Q16890 204 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 EXOC3L4Q17RC7 722 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 MS4A13Q5J8X5 152 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 GJB7Q6PEY0 223 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 TAC4Q86UU9 113 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 PRICKLE1Q96MT3 831 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 NUCKS1Q9H1E3 243 aaKnown RBP23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 ACP6Q9NPH0 428 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 APEX2Q9UBZ4 518 aa23.1■■□□□ 1.29
TRAPPC4-210ENST00000531290 GON4LQ3T8J9 2241 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 BCAT2O15382 392 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 ASLP04424 464 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 CD59P13987 128 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 SPINK2P20155 84 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 MTIF2P46199 727 aaKnown RBP23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 RPS14P62263 151 aaKnown RBP23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 GRIK2Q13002 908 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 HNRNPDQ14103 355 aaKnown RBP23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 DCAF6Q58WW2 860 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 CFAP52Q8N1V2 620 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 MLKLQ8NB16 471 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 TTC17Q96AE7 1141 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 TJP2Q9UDY2 1190 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 SLC12A6Q9UHW9 1150 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 EIF2B4Q9UI10 523 aaKnown RBP23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 CYTH4Q9UIA0 394 aa23.09■■□□□ 1.29
TRAPPC4-210ENST00000531290 CHD8Q9HCK8 2581 aa23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 TRUB2O95900 331 aaKnown RBP23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 CSKP41240 450 aa23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 PDCLQ13371 301 aa23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 TTC31Q49AM3 519 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 ZC3H12AQ5D1E8 599 aaKnown RBP23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 SNX19Q92543 992 aa23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 MYEOVQ96EZ4 313 aa23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 LMLNQ96KR4 655 aa23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 BTBD1Q9H0C5 482 aa23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 WASF3Q9UPY6 502 aa23.08■■□□□ 1.29
TRAPPC4-210ENST00000531290 H0Y626 953 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 MOCS3O95396 460 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 TOP3BO95985 862 aaKnown RBP23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 PROS1P07225 676 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 ACSL1P33121 698 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 ZNF776Q68DI1 518 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 CHSY1Q86X52 802 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 LGI2Q8N0V4 545 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 BTN2A3PQ96KV6 586 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 SCNM1Q9BWG6 230 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 KIAA1522Q9P206 1035 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 NCKAP1Q9Y2A7 1128 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 CEP83Q9Y592 693 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 PCDHB9Q9Y5E1 797 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 PLXND1Q9Y4D7 1925 aa23.07■■□□□ 1.28
TRAPPC4-210ENST00000531290 GTPBP10A4D1E9 387 aaKnown RBP23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 BECN2A8MW95 431 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 SH3BP5O60239 455 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 RNASEH1O60930 286 aaKnown RBP23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 GJB3O75712 270 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 LUC7L3O95232 432 aaKnown RBP23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 C7P10643 843 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 PON1P27169 355 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 CDK17Q00537 523 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 APBA1Q02410 837 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 PTK2Q05397 1052 aa23.06■■□□□ 1.28
TRAPPC4-210ENST00000531290 SFSWAPQ12872 951 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms