RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SLC14A1Q13336 389 aa21.7■■□□□ 1.06
SMPD1-204ENST00000530395 HNRNPDQ14103 355 aaKnown RBP21.7■■□□□ 1.06
SMPD1-204ENST00000530395 BEND5Q7L4P6 421 aa21.7■■□□□ 1.06
SMPD1-204ENST00000530395 OR2I1PQ8NGU4 316 aa21.7■■□□□ 1.06
SMPD1-204ENST00000530395 STK32AQ8WU08 396 aa21.7■■□□□ 1.06
SMPD1-204ENST00000530395 FCRL2Q96LA5 508 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-204ENST00000530395 STIM2Q9P246 746 aa21.7■■□□□ 1.06
SMPD1-204ENST00000530395 AKAP13Q12802 2813 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 METTL12A8MUP2 240 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 THAP12O43422 761 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 GNA15P30679 374 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 CD70P32970 193 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 RDXP35241 583 aaKnown RBP21.69■■□□□ 1.06
SMPD1-204ENST00000530395 ZBTB16Q05516 673 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 PTPRNQ16849 979 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 NADSYN1Q6IA69 706 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 DENND1BQ6P3S1 775 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 FAM124AQ86V42 546 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 ZNF366Q8N895 744 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 WFDC5Q8TCV5 224 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 ADAM33Q9BZ11 813 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 SUN2Q9UH99 717 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 RWDD2AQ9UIY3 292 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 WASF3Q9UPY6 502 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 NAALADL1Q9UQQ1 740 aa21.69■■□□□ 1.06
SMPD1-204ENST00000530395 IGF2RP11717 2491 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 SPAARA0A1B0GVQ0 90 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 APOEP02649 317 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 DNTTP04053 509 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 FYNP06241 537 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 PROS1P07225 676 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 ST8SIA6P61647 398 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 CDH18Q13634 790 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 TTC31Q49AM3 519 aaPredicted RBP21.68■■□□□ 1.06
SMPD1-204ENST00000530395 UNQ6494/PRO21346Q6UXR6 183 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 CREBRFQ8IUR6 639 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 FIBINQ8TAL6 211 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 ADAM32Q8TC27 787 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 ZNF606Q8WXB4 792 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 PRICKLE1Q96MT3 831 aaPredicted RBP21.68■■□□□ 1.06
SMPD1-204ENST00000530395 MED15Q96RN5 788 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 SLC4A5Q9BY07 1137 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 KIAA1468Q9P260 1216 aa21.68■■□□□ 1.06
SMPD1-204ENST00000530395 NUMA1Q14980 2115 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 H0Y626 953 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 BCAT2O15382 392 aaPredicted RBP21.67■■□□□ 1.06
SMPD1-204ENST00000530395 TRIM16O95361 564 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 MOCS2O96007 188 aaPredicted RBP21.67■■□□□ 1.06
SMPD1-204ENST00000530395 ASLP04424 464 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 CD59P13987 128 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 SPINK2P20155 84 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 UBE2HP62256 183 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 MS4A13Q5J8X5 152 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 TRIM65Q6PJ69 517 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 TAC4Q86UU9 113 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 CARNMT1Q8N4J0 409 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 SNX19Q92543 992 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 SLC39A13Q96H72 371 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 CRACR2AQ9BSW2 395 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 SCNM1Q9BWG6 230 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 POPDC2Q9HBU9 364 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 PRSS16Q9NQE7 514 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 EIF2B4Q9UI10 523 aaKnown RBP21.67■■□□□ 1.06
SMPD1-204ENST00000530395 WDFY3Q8IZQ1 3526 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 ZFHX4Q86UP3 3567 aa21.67■■□□□ 1.06
SMPD1-204ENST00000530395 CHD6Q8TD26 2715 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 E5RJQ4 531 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 PAPSS1O43252 624 aaPredicted RBP21.66■■□□□ 1.06
SMPD1-204ENST00000530395 GJB3O75712 270 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 CER1O95813 267 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 C7P10643 843 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 USP8P40818 1118 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 RPS14P62263 151 aaKnown RBP21.66■■□□□ 1.06
SMPD1-204ENST00000530395 RPS24P62847 133 aaKnown RBP21.66■■□□□ 1.06
SMPD1-204ENST00000530395 ZNF776Q68DI1 518 aaPredicted RBP21.66■■□□□ 1.06
SMPD1-204ENST00000530395 IL27RAQ6UWB1 636 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 GBP6Q6ZN66 633 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 TMEM110Q86TL2 294 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 TTC17Q96AE7 1141 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 BTBD1Q9H0C5 482 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 NUCKS1Q9H1E3 243 aaKnown RBP21.66■■□□□ 1.06
SMPD1-204ENST00000530395 APEX2Q9UBZ4 518 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 TJP2Q9UDY2 1190 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 PCDHB9Q9Y5E1 797 aa21.66■■□□□ 1.06
SMPD1-204ENST00000530395 CFAP47Q6ZTR5 3102 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 NYNRINQ9P2P1 1898 aaKnown RBP21.65■■□□□ 1.06
SMPD1-204ENST00000530395 C1QTNF9BB2RNN3 333 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 MOCS3O95396 460 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 TOP3BO95985 862 aaKnown RBP21.65■■□□□ 1.06
SMPD1-204ENST00000530395 C1QTNF9P0C862 333 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 CSKP41240 450 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 YWHAZP63104 245 aaKnown RBP21.65■■□□□ 1.06
SMPD1-204ENST00000530395 PDCLQ13371 301 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 CAMK4Q16566 473 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 ARHGAP44Q17R89 818 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 SYPL2Q5VXT5 272 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 NAXDQ8IW45 347 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 THAP9Q9H5L6 903 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 NEUROG3Q9Y4Z2 214 aa21.65■■□□□ 1.06
SMPD1-204ENST00000530395 RNASEH1O60930 286 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms