RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SLC2A14Q8TDB8 520 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 BPIFB1Q8TDL5 484 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 EZH1Q92800 747 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-212ENST00000528930 FGF11Q92914 225 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 SMARCD1Q96GM5 515 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 TMEM176AQ96HP8 235 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 FAM83CQ9BQN1 747 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 MED10Q9BTT4 135 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 NT5C1AQ9BXI3 368 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 NRSN2Q9GZP1 204 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 ZNF768Q9H5H4 540 aaKnown RBP8.92□□□□□ -0.98
SSBP3-212ENST00000528930 CPNE5Q9HCH3 593 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 FBRSL1Q9HCM7 1045 aaKnown RBP8.92□□□□□ -0.98
SSBP3-212ENST00000528930 CSNK1G1Q9HCP0 422 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 TDP1Q9NUW8 608 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 MED13Q9UHV7 2174 aa8.92□□□□□ -0.98
SSBP3-212ENST00000528930 NAV3Q8IVL0 2385 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 ATP8B3O60423 1300 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 BLACEA4D250 179 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 HHLA1C9JL84 531 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 AP1G2O75843 785 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 OLFM2O95897 454 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 USP17L7P0C7H9 530 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 ZNF883P0CG24 379 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 CD58P19256 250 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 DRD1P21728 446 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 PPP3CCP48454 512 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 FMO5P49326 533 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 TERF1P54274 439 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 ZXDBP98169 803 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 DHX9Q08211 1270 aaKnown RBP8.91□□□□□ -0.98
SSBP3-212ENST00000528930 CCDC173Q0VFZ6 552 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 PAK1Q13153 545 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 CCDC40Q4G0X9 1142 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 ARHGAP40Q5TG30 622 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 CLEC20AQ6ZU45 233 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 TMPRSS12Q86WS5 348 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 TRIM59Q8IWR1 403 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 UBR7Q8N806 425 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 ARL14EPQ8N8R7 260 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-212ENST00000528930 SLC4A11Q8NBS3 891 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 SCAMP5Q8TAC9 235 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 LMO3Q8TAP4 145 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 CYFIP2Q96F07 1278 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 PKNOX2Q96KN3 472 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 SPACA7Q96KW9 195 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 CDC6Q99741 560 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 SRRTQ9BXP5 876 aaKnown RBP8.91□□□□□ -0.98
SSBP3-212ENST00000528930 RNF38Q9H0F5 515 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 CLSTN2Q9H4D0 955 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 KIF9Q9HAQ2 790 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 TRPC7Q9HCX4 862 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 DMAP1Q9NPF5 467 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-212ENST00000528930 HPS4Q9NQG7 708 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 KRT82Q9NSB4 513 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 CISHQ9NSE2 258 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 FAM49BQ9NUQ9 324 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 EHD2Q9NZN4 543 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 TRPM5Q9NZQ8 1165 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 SEPT3Q9UH03 358 aa8.91□□□□□ -0.98
SSBP3-212ENST00000528930 NF1P21359 2839 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 TRAV19A0A0A6YYK7 116 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 A0A1B0GTL3 188 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 OTOL1A6NHN0 477 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-212ENST00000528930 RTN3O95197 1032 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-212ENST00000528930 GNA14O95837 355 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 OAS1P00973 400 aaKnown RBP8.9□□□□□ -0.98
SSBP3-212ENST00000528930 ZDHHC11BP0C7U3 371 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 TCF3P15923 654 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 PFKLP17858 780 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 HDCP19113 662 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 YWHAQP27348 245 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 ADORA2BP29275 332 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 PGFP49763 221 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 SLC5A3P53794 718 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 RAD23BP54727 409 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 MAP3K7CLP57077 242 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 SLC7A9P82251 487 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 USP4Q13107 963 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 CUL2Q13617 745 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 NR6A1Q15406 480 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 ZNF77Q15935 545 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 MAP7D1Q3KQU3 841 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 ZNF394Q53GI3 561 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 SNX30Q5VWJ9 437 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 TRIM68Q6AZZ1 485 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 DBX2Q6ZNG2 339 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 FRMD1Q8N878 549 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 RLN3Q8WXF3 142 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 OVCA2Q8WZ82 227 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 OCSTAMPQ9BR26 566 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 FAM124BQ9H5Z6 455 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-212ENST00000528930 GKN1Q9NS71 199 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 STARD5Q9NSY2 213 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 COMMD8Q9NX08 183 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 CHORDC1Q9UHD1 332 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-212ENST00000528930 FKBPLQ9UIM3 349 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 RWDD2AQ9UIY3 292 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 ARHGAP26Q9UNA1 814 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 DNHD1Q96M86 4753 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms