RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 BBS2Q9BXC9 721 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 FRMD8P1Q9BZ68 369 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 LACRTQ9GZZ8 138 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 BRD8Q9H0E9 1235 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 KCNF1Q9H3M0 494 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 DHX35Q9H5Z1 703 aaKnown RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 GKN1Q9NS71 199 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 RNF14Q9UBS8 474 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 WNT16Q9UBV4 365 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 LIMD1Q9UGP4 676 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 PCSK1NQ9UHG2 260 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 FZD10Q9ULW2 581 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 PCDHA3Q9Y5H8 950 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 KIF26AQ9ULI4 1882 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 DOCK4Q8N1I0 1966 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 IGLV3-10A0A075B6K4 115 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 LRRD1A4D1F6 860 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 GRID2IPA4D2P6 1211 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 CTAGE9A4FU28 777 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 C19orf67A6NJJ6 358 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 H0Y626 953 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PRAMEF12O95522 483 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 ATP5BP06576 529 aaKnown RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 RARAP10276 462 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 ADH5P11766 374 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PRLRP16471 622 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 FCARP24071 287 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 EPHB2P29323 1055 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 OR1E1P30953 314 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PTPN7P35236 360 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 VIPR2P41587 438 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 MAGEA9P43362 315 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 NR2C2P49116 596 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 CDH6P55285 790 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 YBEYP58557 167 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 SLC25A11Q02978 314 aaKnown RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 ZNF33AQ06730 810 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 AUHQ13825 339 aaKnown RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 EIF4HQ15056 248 aaKnown RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PPP2R5EQ16537 467 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 ANO4Q32M45 955 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PARP15Q460N3 678 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 FBXO43Q4G163 708 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PPP6R3Q5H9R7 873 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 ZNF569Q5MCW4 686 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PIK3R6Q5UE93 754 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 TANGO2Q6ICL3 276 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 RWDD4Q6NW29 188 aaKnown RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PARM1Q6UWI2 310 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 TMCO3Q6UWJ1 677 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 TRMT11Q7Z4G4 463 aaKnown RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 NT5DC3Q86UY8 548 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 CCDC50Q8IVM0 306 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 BBS7Q8IWZ6 715 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 ADGRG2Q8IZP9 1017 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 LGI2Q8N0V4 545 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 GJD3Q8N144 294 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 BBS5Q8N3I7 341 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 SLC44A3Q8N4M1 653 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 LRRC57Q8N9N7 239 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 NSMCE1Q8WV22 266 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 HSPH1Q92598 858 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 PBKQ96KB5 322 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 KXD1Q9BQD3 176 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 FAM83CQ9BQN1 747 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 IER2Q9BTL4 223 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 SNRNP25Q9BV90 132 aaKnown RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 CALN1Q9BXU9 219 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 SIK2Q9H0K1 926 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 CARD9Q9H257 536 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 ECT2Q9H8V3 914 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 KIAA1522Q9P206 1035 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-211ENST00000528787 DEC1Q9P2X7 70 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 DUSP12Q9UNI6 340 aa8.18□□□□□ -1.1
SSBP3-211ENST00000528787 MYO10Q9HD67 2058 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 GOLGA6L10A0A0M3HER8 536 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 ILVBLA1L0T0 632 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 ARHGAP42A6NI28 874 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 DRGXA6NNA5 263 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 WASH4PA8MWX3 477 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 E9PAM4 449 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 PPP1R12AO14974 1030 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 ZBTB24O43167 697 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 MTSS1O43312 755 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 CREB3O43889 395 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 CACNG3O60359 315 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 SRGAP2O75044 1071 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 PENKP01210 267 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 KRT1P04264 644 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 ASLP04424 464 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 APODP05090 189 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 BMP1P13497 986 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 TYRP14679 529 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 IL9P15248 144 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 DRD1P21728 446 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 TGM2P21980 687 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 HOXC13P31276 330 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 KCNQ1P51787 676 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms