RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PIGSQ96S52 555 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 BARD1Q99728 777 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 ADAM2Q99965 735 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 PHF7Q9BWX1 381 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 TAOK3Q9H2K8 898 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 R3HDMLQ9H3Y0 253 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 KCNK9Q9NPC2 374 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 KLC4Q9NSK0 619 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 EHD3Q9NZN3 535 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 DKK2Q9UBU2 259 aa3.61□□□□□ -1.83
BRCA2-203ENST00000528762 CNOT7Q9UIV1 285 aaKnown RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 UBE2J1Q9Y385 318 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 TTBK1Q5TCY1 1321 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-203ENST00000528762 AGAP5A6NIR3 686 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 M0QZQ0 153 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 AP4M1O00189 453 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ZNF213O14771 459 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 CA12O43570 354 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 SPRY2O43597 315 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ZBED4O75132 1171 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 GUCY1B2O75343 617 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 SPDEFO95238 335 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 CYP3A4P08684 503 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 CHN1P15882 459 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 RPS6KB1P23443 525 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ADRA1DP25100 572 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 PAFAH1B1P43034 410 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 RPP30P78346 268 aaKnown RBP3.6□□□□□ -1.83
BRCA2-203ENST00000528762 DEUP1Q05D60 604 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 TBL3Q12788 808 aaKnown RBP3.6□□□□□ -1.83
BRCA2-203ENST00000528762 FOXI1Q12951 378 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 CAMK1Q14012 370 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 KRT32Q14532 448 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 PTPRRQ15256 657 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 GPR68Q15743 365 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 NFIL3Q16649 462 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 TSTQ16762 297 aaKnown RBP3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ZNF618Q5T7W0 954 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 STRIP1Q5VSL9 837 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 LIPMQ5VYY2 423 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 FAM205BPQ63HN1 556 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 TTLL5Q6EMB2 1281 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 PARS2Q7L3T8 475 aaKnown RBP3.6□□□□□ -1.83
BRCA2-203ENST00000528762 R3HCC1LQ7Z5L2 792 aaKnown RBP3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ARMC8Q8IUR7 673 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 LNX2Q8N448 690 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 SLC44A3Q8N4M1 653 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 LINS1Q8NG48 757 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 SLC2A12Q8TD20 617 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ASB10Q8WXI3 467 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 CAVIN3Q969G5 261 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ARRDC3Q96B67 414 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 CENPOQ9BU64 300 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ALG8Q9BVK2 526 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 CINPQ9BW66 212 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ARHGAP39Q9C0H5 1083 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 TOR3AQ9H497 397 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 SAP30LQ9HAJ7 183 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 PDE11AQ9HCR9 933 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ORC3Q9UBD5 711 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-203ENST00000528762 DKK3Q9UBP4 350 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 TESQ9UGI8 421 aaKnown RBP3.6□□□□□ -1.83
BRCA2-203ENST00000528762 TRPC5Q9UL62 973 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-203ENST00000528762 SUFUQ9UMX1 484 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 SH2B3Q9UQQ2 575 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 SPATA31A6Q5VVP1 1343 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 ADGRA2Q96PE1 1338 aa3.6□□□□□ -1.83
BRCA2-203ENST00000528762 CCDC187A0A096LP49 1063 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 MBD3L5A6NJ08 208 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-203ENST00000528762 SPTLC2O15270 562 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 YY2O15391 372 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 FIBPO43427 364 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 PROM1O43490 865 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 TMPRSS11DO60235 418 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 TULP3O75386 442 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 HEXIM1O94992 359 aaKnown RBP3.59□□□□□ -1.83
BRCA2-203ENST00000528762 RHOP08100 348 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 IL6RP08887 468 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-203ENST00000528762 TMIGD3P0DMS9 266 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-203ENST00000528762 NR2F6P10588 404 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 PEPDP12955 493 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 ZFXP17010 805 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-203ENST00000528762 MCM5P33992 734 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 IGHMBP2P38935 993 aaKnown RBP3.59□□□□□ -1.83
BRCA2-203ENST00000528762 PNPLA4P41247 253 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 RAD52P43351 418 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 CLCN2P51788 898 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 RCAN1P53805 252 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 FAM3BP58499 235 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-203ENST00000528762 C21orf58P58505 322 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 ERV3-1Q14264 604 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 GPR162Q16538 588 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 FAM187BQ17R55 369 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 DENND2CQ68D51 928 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 WDR93Q6P2C0 686 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 DENND1BQ6P3S1 775 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 PTCHD4Q6ZW05 846 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 H1FNTQ75WM6 255 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-203ENST00000528762 RD3Q7Z3Z2 195 aa3.59□□□□□ -1.83
BRCA2-203ENST00000528762 GALNT5Q7Z7M9 940 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms