RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 PDE4CQ08493 712 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 UBAP2LQ14157 1087 aaKnown RBP10.34□□□□□ -0.75
CAPN1-210ENST00000527699 GLIPR1L2Q4G1C9 344 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 DCAF17Q5H9S7 520 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-210ENST00000527699 KCNT1Q5JUK3 1230 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 TCERG1LQ5VWI1 586 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 RFWD3Q6PCD5 774 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 GLRX5Q86SX6 157 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 ZC3H3Q8IXZ2 948 aaKnown RBP10.34□□□□□ -0.75
CAPN1-210ENST00000527699 WFDC5Q8TCV5 224 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 GANCQ8TET4 914 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 UBE2Q2Q8WVN8 375 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 MED8Q96G25 268 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 SPATA32Q96LK8 384 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 DUSP9Q99956 384 aaKnown RBP10.34□□□□□ -0.75
CAPN1-210ENST00000527699 NUP58Q9BVL2 599 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 DCLK3Q9C098 648 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 LHX5Q9H2C1 402 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 GOLPH3LQ9H4A5 285 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 TMEM8AQ9HCN3 771 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 CHMP5Q9NZZ3 219 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 CFAP45Q9UL16 551 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 TRAF3IP3Q9Y228 551 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 ZNF510Q9Y2H8 683 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 SLC27A6Q9Y2P4 619 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 FBN2P35556 2912 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 E9PAM4 449 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 CBX4O00257 560 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 TBL1XO60907 577 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 CBFA2T3O75081 653 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 ZBED1O96006 694 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 HOXD9P28356 352 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-210ENST00000527699 CD70P32970 193 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 PSEN1P49768 467 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 TLE3Q04726 772 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 ADIGQ0VDE8 80 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 KCNH2Q12809 1159 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 DPYDQ12882 1025 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 SERINC3Q13530 473 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 KIF19Q2TAC6 998 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 MPPE1Q53F39 396 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 C6orf118Q5T5N4 469 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 KLHDC10Q6PID8 442 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 INTS8Q75QN2 995 aaKnown RBP10.33□□□□□ -0.76
CAPN1-210ENST00000527699 RNF139Q8WU17 664 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 DNASE2BQ8WZ79 361 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 ERCC4Q92889 916 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-210ENST00000527699 CCDC47Q96A33 483 aaKnown RBP10.33□□□□□ -0.76
CAPN1-210ENST00000527699 GDPD2Q9HCC8 539 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 PNPLA8Q9NP80 782 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 RAB20Q9NX57 234 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 CLIC5Q9NZA1 410 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 TSPAN16Q9UKR8 245 aa10.33□□□□□ -0.76
CAPN1-210ENST00000527699 RELNP78509 3460 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 YJEFN3A6XGL0 299 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 E7ENQ6 273 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 H0Y8X5 98 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 RHOBTB3O94955 611 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CER1O95813 267 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CMA1P23946 247 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 HLA-FP30511 346 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 OXTRP30559 389 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 MXI1P50539 228 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 RPS14P62263 151 aaKnown RBP10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CBWD6Q4V339 395 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 RAB41Q5JT25 222 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CBWD3Q5JTY5 395 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CBWD5Q5RIA9 395 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 BROXQ5VW32 411 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 MBLAC2Q68D91 279 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 KRT39Q6A163 491 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 BHLHA9Q7RTU4 235 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 ADAT2Q7Z6V5 191 aaKnown RBP10.32□□□□□ -0.76
CAPN1-210ENST00000527699 GATAD2AQ86YP4 633 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 SPACA3Q8IXA5 215 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 ARHGAP18Q8N392 663 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 RBBP8NLQ8NC74 664 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CADM4Q8NFZ8 388 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 OR2T3Q8NH03 318 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CLEC4CQ8WTT0 213 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 TMA16Q96EY4 203 aaKnown RBP10.32□□□□□ -0.76
CAPN1-210ENST00000527699 MYEOVQ96EZ4 313 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 NAF1Q96HR8 494 aaKnown RBP10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CDK5RAP1Q96SZ6 601 aaKnown RBP10.32□□□□□ -0.76
CAPN1-210ENST00000527699 LRRC4Q9HBW1 653 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CPNE5Q9HCH3 593 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 TM9SF3Q9HD45 589 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 PRSS16Q9NQE7 514 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 TOR4AQ9NXH8 423 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 SEPT3Q9UH03 358 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 GGA2Q9UJY4 613 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 PLA2G4CQ9UP65 541 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 HPSEQ9Y251 543 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 ANKRD6Q9Y2G4 727 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 FLNCQ14315 2725 aa10.32□□□□□ -0.76
CAPN1-210ENST00000527699 CACNA1DQ01668 2161 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 SEMA4FO95754 770 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 DNTTP04053 509 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 PABPC1P11940 636 aaKnown RBP10.31□□□□□ -0.76
CAPN1-210ENST00000527699 CR2P20023 1033 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms