RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 FAM35AQ86V20 835 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 SLC47A2Q86VL8 602 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 VSTM4Q8IW00 320 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 ADGRG2Q8IZP9 1017 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 TTC39CQ8N584 583 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 ARL14EPQ8N8R7 260 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-204ENST00000526430 TTC16Q8NEE8 873 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 ZNF606Q8WXB4 792 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 FUBP3Q96I24 572 aaKnown RBP eCLIP11.44□□□□□ -0.58
NEDD8-204ENST00000526430 FAM81BQ96LP2 452 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 ANP32EQ9BTT0 268 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 EDEM3Q9BZQ6 932 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 ARHGEF4Q9NR80 690 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 IL37Q9NZH6 218 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 KIAA1257Q9ULG3 409 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 CYP8B1Q9UNU6 501 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 ITIH6Q6UXX5 1313 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 A0A1W2PQF6 199 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 GOLGA8CPA6NN73 597 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 SLC9A3R1O14745 358 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-204ENST00000526430 ADH1CP00326 375 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 GYPCP04921 128 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 NDUFV2P19404 249 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 SOX5P35711 763 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 SLC6A11P48066 632 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 PGFP49763 221 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 ZNF75DP51815 510 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 USP46P62068 366 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 YWHAEP62258 255 aaKnown RBP11.43□□□□□ -0.58
NEDD8-204ENST00000526430 CXADRP78310 365 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 BNC1Q01954 994 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 CYP27A1Q02318 531 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 SEMG2Q02383 582 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 RAPGEF1Q13905 1077 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 NUMA1Q14980 2115 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 MAPRE1Q15691 268 aaKnown RBP11.43□□□□□ -0.58
NEDD8-204ENST00000526430 HLA-BQ31612 363 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 LCLAT1Q6UWP7 414 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 DHRS13Q6UX07 377 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 VSTM1Q6UX27 236 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 CLEC20AQ6ZU45 233 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 GPRIN1Q7Z2K8 1008 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 NOP9Q86U38 636 aaKnown RBP11.43□□□□□ -0.58
NEDD8-204ENST00000526430 C12orf40Q86WS4 652 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 FMNL3Q8IVF7 1028 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-204ENST00000526430 ANKRD52Q8NB46 1076 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 NEK11Q8NG66 645 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 SLC35F5Q8WV83 523 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 FGF11Q92914 225 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 C8orf48Q96LL4 319 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 DUSP16Q9BY84 665 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 ZDHHC4Q9NPG8 344 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 AIPL1Q9NZN9 384 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 CYTH4Q9UIA0 394 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 NOCTQ9UK39 431 aaKnown RBP11.43□□□□□ -0.58
NEDD8-204ENST00000526430 CAPN11Q9UMQ6 739 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.43□□□□□ -0.58
NEDD8-204ENST00000526430 BTBD3Q9Y2F9 522 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 DAAM1Q9Y4D1 1078 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 BOD1L1Q8NFC6 3051 aa11.43□□□□□ -0.58
NEDD8-204ENST00000526430 ARID1BQ8NFD5 2236 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-204ENST00000526430 C2orf78A6NCI8 922 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 F8VP50 259 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 PYCARD-AS1I3L0S3 204 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 ZBTB24O43167 697 aaPredicted RBP11.42□□□□□ -0.58
NEDD8-204ENST00000526430 GFPT2O94808 682 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 CLSTN1O94985 981 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 CDK4P11802 303 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 CYP11B1P15538 503 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 HDCP19113 662 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 MAOBP27338 520 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 ADORA2BP29275 332 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 NTSR1P30989 418 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 GRK6P43250 576 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 GPD2P43304 727 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 RPL34P49207 117 aaKnown RBP11.42□□□□□ -0.58
NEDD8-204ENST00000526430 RPL10AP62906 217 aaKnown RBP11.42□□□□□ -0.58
NEDD8-204ENST00000526430 ZXDBP98169 803 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 KDSRQ06136 332 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 SGO2Q562F6 1265 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 HGSNATQ68CP4 663 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 DENND1BQ6P3S1 775 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 C4orf50Q6ZRC1 276 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 SPATA2LQ8IUW3 424 aaPredicted RBP11.42□□□□□ -0.58
NEDD8-204ENST00000526430 ZCCHC9Q8N567 271 aaKnown RBP11.42□□□□□ -0.58
NEDD8-204ENST00000526430 CADM4Q8NFZ8 388 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 UBA3Q8TBC4 463 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 PCDHB18PQ96TA0 734 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 SEMA4CQ9C0C4 833 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 TSPAN16Q9UKR8 245 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 PCDHGA1Q9Y5H4 931 aa11.42□□□□□ -0.58
NEDD8-204ENST00000526430 A0A1W2PQJ5 194 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 FAM92AA1XBS5 289 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 LRRC53A6NM62 1247 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 MEI4A8MW99 385 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 LEFTY2O00292 366 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 BCAT2O15382 392 aaPredicted RBP11.41□□□□□ -0.58
NEDD8-204ENST00000526430 SLC28A2O43868 658 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms