RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 MBLAC2Q68D91 279 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 CCDC186Q7Z3E2 898 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 UNC93AQ86WB7 457 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 CCDC117Q8IWD4 279 aaPredicted RBP9.72□□□□□ -0.85
PTPN12-216ENST00000523952 OR2T34Q8NGX1 318 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 PLD4Q96BZ4 506 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 CYFIP2Q96F07 1278 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 CCDC97Q96F63 343 aaPredicted RBP9.72□□□□□ -0.85
PTPN12-216ENST00000523952 GZF1Q9H116 711 aaPredicted RBP9.72□□□□□ -0.85
PTPN12-216ENST00000523952 ABCG4Q9H172 646 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 XYLT2Q9H1B5 865 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 TMEM245Q9H330 911 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 PABPC3Q9H361 631 aaKnown RBP9.72□□□□□ -0.85
PTPN12-216ENST00000523952 PNPLA8Q9NP80 782 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 AGPAT3Q9NRZ7 376 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 EVA1BQ9NVM1 165 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 GGA2Q9UJY4 613 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 SMC3Q9UQE7 1217 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 PCDHB1Q9Y5F3 818 aa9.72□□□□□ -0.85
PTPN12-216ENST00000523952 TBC1D3DA0A087WVF3 549 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TBC1D3IA0A087WXS9 549 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TBC1D3EA0A087X179 549 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TBC1D3KA0A087X1G2 549 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 A0A1W2PP55 124 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TBC1D3FA6NER0 549 aaPredicted RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TBC1D3LB9A6J9 549 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 SDC3O75056 442 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 DLDP09622 509 aaKnown RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TBC1D3HP0C7X1 549 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 PABPC1P11940 636 aaKnown RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 RBMS1P29558 406 aaKnown RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 HLA-FP30511 346 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 CASP4P49662 377 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 NXPH1P58417 271 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 ERVPABLB-1P60509 514 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 SNRPFP62306 86 aaKnown RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 ASIC1P78348 528 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 AMPD3Q01432 767 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 NFATC3Q12968 1075 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 SHBQ15464 509 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 SGSM1Q2NKQ1 1148 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 KIAA1614Q5VZ46 1190 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TBC1D3GQ6DHY5 549 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TBC1D3CQ6IPX1 549 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 CCDC81Q6ZN84 652 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 SND1Q7KZF4 910 aaKnown RBP eCLIP9.71□□□□□ -0.863e-9■□□□□ 10.2
PTPN12-216ENST00000523952 PRPF39Q86UA1 669 aaKnown RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 NELFCDQ8IXH7 590 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TBC1D3Q8IZP1 549 aaPredicted RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 CRYBG2Q8N1P7 616 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 ZNF276Q8N554 614 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 PDILTQ8N807 584 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 OR14C36Q8NHC7 312 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 RFFLQ8WZ73 363 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 ZNF516Q92618 1163 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 HPS3Q969F9 1004 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 ELMO3Q96BJ8 720 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TMA16Q96EY4 203 aaKnown RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 ORAI3Q9BRQ5 295 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 ARHGAP9Q9BRR9 750 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 IMPG2Q9BZV3 1241 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TRIM4Q9C037 500 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 SDCBP2Q9H190 292 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 RSPH9Q9H1X1 276 aaPredicted RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 VRTNQ9H8Y1 702 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 ERVMER34-1Q9H9K5 563 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 HMGXB4Q9UGU5 601 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 IL17BQ9UHF5 180 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TPX2Q9ULW0 747 aaKnown RBP9.71□□□□□ -0.86
PTPN12-216ENST00000523952 CEP83Q9Y592 693 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 UBE4BO95155 1302 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 RP1P56715 2156 aa9.71□□□□□ -0.86
PTPN12-216ENST00000523952 TYW5A2RUC4 315 aaKnown RBP9.7□□□□□ -0.86
PTPN12-216ENST00000523952 MID1O15344 667 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 SIGLEC6O43699 453 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 CSO75390 466 aaKnown RBP9.7□□□□□ -0.86
PTPN12-216ENST00000523952 KRT10P13645 584 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 HOXD9P28356 352 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-216ENST00000523952 PIK3CAP42336 1068 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 VASPP50552 380 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-216ENST00000523952 CCR5P51681 352 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 KIF11P52732 1056 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 SLC8A3P57103 927 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 CEBPZQ03701 1054 aaKnown RBP9.7□□□□□ -0.86
PTPN12-216ENST00000523952 STAT4Q14765 748 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 CST6Q15828 149 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 RNF219Q5W0B1 726 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-216ENST00000523952 TMC6Q7Z403 805 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 SCD5Q86SK9 330 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 MMAAQ8IVH4 418 aaKnown RBP9.7□□□□□ -0.86
PTPN12-216ENST00000523952 ZNF557Q8N988 423 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-216ENST00000523952 RBBP8NLQ8NC74 664 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-216ENST00000523952 RNF139Q8WU17 664 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 TTC9Q92623 222 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 P2RY11Q96G91 374 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 VCPIP1Q96JH7 1222 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 NT5C1AQ9BXI3 368 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 NEUROG2Q9H2A3 272 aa9.7□□□□□ -0.86
PTPN12-216ENST00000523952 POLR1BQ9H9Y6 1135 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms