RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CC2D1BQ5T0F9 858 aaKnown RBP6.74□□□□□ -1.33
CPNE3-206ENST00000523469 ATPAF1Q5TC12 328 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-206ENST00000523469 KIAA1614Q5VZ46 1190 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 CCDC174Q6PII3 467 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 ZNF813Q6ZN06 617 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 ZNF66Q6ZN08 573 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 ZNF398Q8TD17 642 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 FAR2Q96K12 515 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 CDCP1Q9H5V8 836 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 COL16A1Q07092 1604 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-206ENST00000523469 PLXNC1O60486 1568 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 KDM5DQ9BY66 1539 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 hCG_1642624A0A1W2PR95 340 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 MASP2O00187 686 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 TRIM38O00635 465 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 RPP40O75818 363 aaKnown RBP6.73□□□□□ -1.33
CPNE3-206ENST00000523469 RNF8O76064 485 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 SLC3A2P08195 630 aaKnown RBP6.73□□□□□ -1.33
CPNE3-206ENST00000523469 FOXF2Q12947 444 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 SLC14A1Q13336 389 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 TUBB8Q3ZCM7 444 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 TRIM60Q495X7 471 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 AWAT1Q58HT5 328 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 C16orf71Q8IYS4 520 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-206ENST00000523469 NPIPB3Q92617 1050 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 AKAP1Q92667 903 aaKnown RBP eCLIP6.73□□□□□ -1.33
CPNE3-206ENST00000523469 C5orf34Q96MH7 638 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 RTKNQ9BST9 563 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 PTPRHQ9HD43 1115 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 PCDHB7Q9Y5E2 793 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 ADGBQ8N7X0 1667 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 SAMD9LQ8IVG5 1584 aa6.73□□□□□ -1.33
CPNE3-206ENST00000523469 ATP7AQ04656 1500 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 TCEA3O75764 348 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 TUBB4AP04350 444 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 CYP2D6P10635 497 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 CHKAP35790 457 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 C21orf58P58505 322 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 PFKFB3Q16875 520 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-206ENST00000523469 GRAMD1BQ3KR37 738 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 KLHL17Q6TDP4 642 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 C16orf89Q6UX73 402 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 OR1N1Q8NGS0 311 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 MCRS1Q96EZ8 462 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 EFHD1Q9BUP0 239 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 NUAK2Q9H093 628 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 MAGEH1Q9H213 219 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 SIRT4Q9Y6E7 314 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-206ENST00000523469 NLRP1Q9C000 1473 aa6.72□□□□□ -1.33
CPNE3-206ENST00000523469 CLIP1P30622 1438 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 LOC105369274A0A096LPK9 316 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 LOC102723532A0A0G2JNH3 316 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 PPP6CO00743 305 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 NKX2-8O15522 239 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 ACTL6BO94805 426 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 SLC8A1P32418 973 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 THBS4P35443 961 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 AP2B1P63010 937 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 AAK1Q2M2I8 961 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 TANGO2Q6ICL3 276 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 LIN54Q6MZP7 749 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 KYAT3Q6YP21 454 aaKnown RBP6.71□□□□□ -1.34
CPNE3-206ENST00000523469 SLC44A2Q8IWA5 706 aaPredicted RBP6.71□□□□□ -1.34
CPNE3-206ENST00000523469 CCDC117Q8IWD4 279 aaPredicted RBP6.71□□□□□ -1.34
CPNE3-206ENST00000523469 OR4N4Q8N0Y3 316 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 STT3BQ8TCJ2 826 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 REXO5Q96IC2 774 aaKnown RBP6.71□□□□□ -1.34
CPNE3-206ENST00000523469 CCDC134Q9H6E4 229 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 FRMD4BQ9Y2L6 1034 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 A2MP01023 1474 aa6.71□□□□□ -1.34
CPNE3-206ENST00000523469 CDC42BPAQ5VT25 1732 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 FAM90A18PA6NE21 464 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 FAM90A16PA6NEW6 464 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 FAM90A9PA6NNJ1 464 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 EFCAB8A8MWE9 144 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 FAM90A5PA8MXJ8 464 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 IFRD1O00458 451 aaPredicted RBP6.7□□□□□ -1.34
CPNE3-206ENST00000523469 PRYO14603 147 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 LARGE1O95461 756 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 FAM90A15PP0C7V4 464 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 FAM90A14PP0C7W9 464 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 GYS1P13807 737 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 NDUFS1P28331 727 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 HOXD12P35452 270 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 AGTR2P50052 363 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 SF3A3Q12874 501 aaKnown RBP eCLIP6.7□□□□□ -1.34
CPNE3-206ENST00000523469 GAB1Q13480 694 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 KPNB1Q14974 876 aaKnown RBP6.7□□□□□ -1.34
CPNE3-206ENST00000523469 BTBD16Q32M84 506 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 CEP78Q5JTW2 689 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 ZNF569Q5MCW4 686 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 SULT6B1Q6IMI4 303 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 ERAP2Q6P179 960 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 WDR93Q6P2C0 686 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 NFRKBQ6P4R8 1299 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 RAB11FIP2Q7L804 512 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 ZNF575Q86XF7 245 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 LAS2Q8IYD9 372 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 GALNT16Q8N428 558 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 OTUD7AQ8TE49 926 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms