RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 IGBP1P78318 339 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 MRPS9P82933 396 aaKnown RBP11.69□□□□□ -0.54
SPIDR-211ENST00000519401 TCHHL1Q5QJ38 904 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-211ENST00000519401 KRT79Q5XKE5 535 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 ARCQ7LC44 396 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 NEK8Q86SG6 692 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 LILRA2Q8N149 483 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 AFAP1L2Q8N4X5 818 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 ASCC1Q8N9N2 400 aaKnown RBP11.69□□□□□ -0.54
SPIDR-211ENST00000519401 HIPK4Q8NE63 616 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 TTC17Q96AE7 1141 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 E2F7Q96AV8 911 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 ACAP3Q96P50 834 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 FAM111AQ96PZ2 611 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 MTMR9Q96QG7 549 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 GMLQ99445 158 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 TMEM79Q9BSE2 394 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 YTHDF1Q9BYJ9 559 aaKnown RBP11.69□□□□□ -0.54
SPIDR-211ENST00000519401 GPR88Q9GZN0 384 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.69□□□□□ -0.54
SPIDR-211ENST00000519401 NEK6Q9HC98 313 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 TAS2R14Q9NYV8 317 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 DNMT3BQ9UBC3 853 aaKnown RBP11.69□□□□□ -0.54
SPIDR-211ENST00000519401 UBA2Q9UBT2 640 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-211ENST00000519401 IPO11Q9UI26 975 aaKnown RBP11.69□□□□□ -0.54
SPIDR-211ENST00000519401 TESMINQ9Y4I5 508 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 ATRNL1Q5VV63 1379 aa11.69□□□□□ -0.54
SPIDR-211ENST00000519401 ZNF646O15015 1829 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-211ENST00000519401 C1orf232A0A0U1RR37 186 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 ASNA1O43681 348 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 GABBR2O75899 941 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 UGT2B4P06133 528 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 ITIH1P19827 911 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 RFC1P35251 1148 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-211ENST00000519401 OCA2Q04671 838 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 BST1Q10588 318 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 KLF1Q13351 362 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-211ENST00000519401 IKBKEQ14164 716 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 STILQ15468 1287 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 PCSK7Q16549 785 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 LRIT3Q3SXY7 679 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 MGAT5BQ3V5L5 792 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 HYIQ5T013 277 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 CYP4A22Q5TCH4 519 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 IRAK1BP1Q5VVH5 260 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-211ENST00000519401 PPP1R2P3Q6NXS1 205 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 DRICH1Q6PGQ1 229 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-211ENST00000519401 USP50Q70EL3 339 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-211ENST00000519401 SAMD7Q7Z3H4 446 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 LACC1Q8IV20 430 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 ELMOD2Q8IZ81 293 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 RAB2BQ8WUD1 216 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 CFAP36Q96G28 342 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 SH3YL1Q96HL8 342 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-211ENST00000519401 FAM84BQ96KN1 310 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-211ENST00000519401 COQ7Q99807 217 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 CIB1Q99828 191 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 CLSTN3Q9BQT9 956 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 ZBED2Q9BTP6 218 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 C12orf4Q9NQ89 552 aa11.68□□□□□ -0.54
SPIDR-211ENST00000519401 C7orf72A4D263 438 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 CCNT1O60563 726 aaKnown RBP11.67□□□□□ -0.54
SPIDR-211ENST00000519401 IL1R1P14778 569 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 SLC26A2P50443 739 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 GTF2IP78347 998 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 GNA12Q03113 381 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 RAB39AQ14964 217 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 MAPRE1Q15691 268 aaKnown RBP11.67□□□□□ -0.54
SPIDR-211ENST00000519401 PPP6R3Q5H9R7 873 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-211ENST00000519401 UGT3A1Q6NUS8 523 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 C16orf89Q6UX73 402 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 SNX31Q8N9S9 440 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 RASGRP4Q8TDF6 673 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 VMP1Q96GC9 406 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 VPS35Q96QK1 796 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 PKP2Q99959 881 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 COPS7BQ9H9Q2 264 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-211ENST00000519401 COMMD8Q9NX08 183 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 BARHL2Q9NY43 387 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 ATPIF1Q9UII2 106 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 PSME2Q9UL46 239 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 JAG2Q9Y219 1238 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 EIF3LQ9Y262 564 aaKnown RBP11.67□□□□□ -0.54
SPIDR-211ENST00000519401 BAZ2BQ9UIF8 2168 aaKnown RBP11.67□□□□□ -0.54
SPIDR-211ENST00000519401 KCNA4P22459 653 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 MAP4P27816 1152 aaKnown RBP11.67□□□□□ -0.54
SPIDR-211ENST00000519401 SERPINB1P30740 379 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 TMPRSS15P98073 1019 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 ECT2LQ008S8 904 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 TRAF2Q12933 501 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 FLOT2Q14254 428 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 HERC3Q15034 1050 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 DUSP7Q16829 419 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 STRIP1Q5VSL9 837 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 GPR107Q5VW38 600 aa11.67□□□□□ -0.54
SPIDR-211ENST00000519401 PACRGLQ8N7B6 248 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms